Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 4e-33
 Identities = 98/345 (28%), Positives = 163/345 (47%), Gaps = 28/345 (8%)

Query: 384 NNVSDVMNRVAKGDFTARADE--SRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQ 441
           +++S +       D T R  E  S E  +L +A+N  +S++ D I +     D LN   Q
Sbjct: 448 DSISQIQRMSRDNDLTVRLSEQGSDEIRQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQ 507

Query: 442 KVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVK 501
            +   + G   + ++  E    V  A ++ SA + E SE               A+    
Sbjct: 508 TITHNMTGTRNSVSEQHERTDSVVTAVNEMSASITEVSE--------------FAQRAAT 553

Query: 502 SSEEIKENSEIGVEKVENAISR-MQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAE 560
             +E  +    GV  V N ++R M SI   +    ++I  L  + + I  V  +I+ IAE
Sbjct: 554 FVQEANQKGHGGVS-VGNELARDMTSINQQMASAVEAIARLNHESQSIASVLDVIQAIAE 612

Query: 561 QTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVD 620
           QT LLALNA+IEAARAG+ G+GFAVVA E++ LA + + S E+I   ID +    +  V+
Sbjct: 613 QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTEEIRTKIDRLQKETQSVVN 672

Query: 621 LGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQD 680
              +  + V +GV       D L +I + +NE    +N +      A+E   G     ++
Sbjct: 673 CIEEANNTVVRGVATCHSNTDMLKQIVDMLNE----LNEMNIQIATATEQQRGV---TEE 725

Query: 681 IAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERVSE 725
           I A     +  +  VT    E+N+I+ E   +++E   +S+R+ +
Sbjct: 726 INANITSISDVSASVTVQVGEVNAIVNE---LSDEAMELSKRMGQ 767