Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer:CHASE3 from Pseudomonas syringae pv. syringae B728a

 Score =  135 bits (341), Expect = 4e-36
 Identities = 83/323 (25%), Positives = 170/323 (52%), Gaps = 15/323 (4%)

Query: 388 DVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDEL 447
           D    +A G      D S  +++L KA +   + + ++I+++ +  + L + +Q++    
Sbjct: 225 DAATAIANGKLDTVIDTS-SHDELPKAFDRMQNRLREMIQQISQAANQLVVAVQQIS--- 280

Query: 448 KGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIK 507
            GA E   Q++ A  + + +AS  +A ++E +  +    ENA E +  A  + + S++  
Sbjct: 281 -GASE---QLSGAIQEQSTSASAMAATIEELTVSIHHVSENADEAHELASRSGQQSKD-- 334

Query: 508 ENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLAL 567
                G + +EN +S M  I   +      +  LG+  + I+ +  +I+ IA+QT LLAL
Sbjct: 335 -----GAQVIENTLSSMNGIARTVQLSSTQVAGLGQHSEHISSIVSVIQGIADQTNLLAL 389

Query: 568 NASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKD 627
           NA+IEAARAG+ G+GFAVVA E++ LA+   KS ++I   I+ + + + +TV+    G  
Sbjct: 390 NAAIEAARAGEQGRGFAVVADEVRLLAQNTGKSTKEIAGMIEKIQAGVRETVESMRSGVQ 449

Query: 628 EVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEE 687
           EV++GV        A+++I++S  +    ++ I    +  +  ++   +N +  A ++E+
Sbjct: 450 EVNEGVEMAGTAGQAIIEIRDSSGKVLQVVDQISFALREQTAASQDVARNVERSAQMAEQ 509

Query: 688 FTATAEEVTASTEELNSIIEEIR 710
              + +E+  ++  L ++   ++
Sbjct: 510 NNISVQELLKTSGGLKNLATSLQ 532