Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  127 bits (319), Expect = 1e-33
 Identities = 87/314 (27%), Positives = 157/314 (50%), Gaps = 15/314 (4%)

Query: 414 AINTAVSNVADLIKEL----REELDLL----NIQIQKVEDELKGAEETATQVAEAATQVA 465
           A+    S   DL + L    ++E+  L    N  I+++   +   +ETA Q+ E A  + 
Sbjct: 176 AMEDVASGDGDLTRRLPVESQDEIGRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLG 235

Query: 466 EAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSS---EEIKENSEIGVEKVENAIS 522
             +   + ++QE  +E E+      ++ ++A E   ++    E    ++  V++ +    
Sbjct: 236 SLSGANNLRVQEQRQETEAAVTAVSQLSASAAEVAGNALRTSEAAAEADAQVDESQRRFD 295

Query: 523 RMQSITN-VIDELGK---SIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGD 578
           +   +T  ++DEL +   S++ L ++ +KI+EV  +I  IAEQT LLALNA+IEAARAG+
Sbjct: 296 QSLGLTRQLVDELSRCAISVQQLQQETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGE 355

Query: 579 AGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDE 638
            G+GFAVVA E++ LA   +++  +I   I  V +R+ DTV +    +   DK +   +E
Sbjct: 356 QGRGFAVVADEVRTLASRTQQATGEIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEE 415

Query: 639 VNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTAS 698
           +   L  +   V+        + H A   +  TE   ++  D+A +S   +A +  +  S
Sbjct: 416 IKSMLASVTRLVSNINAMNTEVAHAASEQTSVTENISRSLNDLAGISGSASADSASLAQS 475

Query: 699 TEELNSIIEEIRVI 712
            E L    E +R +
Sbjct: 476 GERLFQQGERLRAL 489