Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 729 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  124 bits (312), Expect = 1e-32
 Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 23/317 (7%)

Query: 403 DESRENNKLEKAINTAVSNVADLIKELREEL-DLLNIQIQKVEDELKGAEETATQVAEAA 461
           D +RE  + E+ +       A L +E    L D  +  + +   +L GA +TA + A+  
Sbjct: 426 DTAREAREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAERADTM 485

Query: 462 TQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAI 521
            Q+A A  D++  + ++SEE+       + V +A EE   + EEI   +    E   +A+
Sbjct: 486 DQLARAVMDENRGVAQTSEEMSG---QTQAVAAAVEELDSAIEEILRQTTGSSEVSGSAV 542

Query: 522 SRMQSITNVIDELGKSIKMLGEDGK-KINEVTGLIKDIAEQTGLLALNASIEAARAGDAG 580
              +++  V+D L         DG  +I E+ GLI+ +A QT LLA+NA+IEAA AG+AG
Sbjct: 543 REAEAMRAVMDSLN--------DGSGRIGEIIGLIEQVAAQTNLLAMNATIEAAHAGNAG 594

Query: 581 KGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLG------LKGKDEVDKGVI 634
           KGFAVVASE+K LA +  +S +DI   I  + + +E+ V         ++  DE+  G+ 
Sbjct: 595 KGFAVVASEVKNLAHQSSQSADDIRKQIAKIRADVENAVSATGRLTDIIRRNDEIVAGIA 654

Query: 635 -AIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAE 693
            ++++ + A  +I  +V   A  +  I       S+ +E + K A ++ A S+   A   
Sbjct: 655 SSVEQQSAATREISRNVQMVAEGVRHISSSVTLVSDVSERSGKAAAEVLAASQ---AMRG 711

Query: 694 EVTASTEELNSIIEEIR 710
           +V   T E++S +  IR
Sbjct: 712 QVGVITGEIDSFLSGIR 728



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 66/348 (18%), Positives = 130/348 (37%), Gaps = 69/348 (19%)

Query: 446 ELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEE 505
           EL  A++T T  AE A    +A     A L+ S++ + S    A+   +   ET+ S E 
Sbjct: 194 ELLQADQTVTGAAEVAKAGEQATQAFEASLRISADAVRSLSILAQAQRAPDLETLSSLES 253

Query: 506 IKENSEIGVEKVENAISRMQSITNVIDELGK------SIKMLGEDGKKI----------- 548
             ++   G+  V + +SR++S     D+L +         MLG++   +           
Sbjct: 254 AFKS---GMASVSSQLSRLKSANVDADQLAQLQRLFDDTMMLGDEMPSLFDRRASALTQV 310

Query: 549 ---NEVTGLIKDIAEQTGLLALN------------ASIEAARAGD------AGKGFAVVA 587
              N++    + IAE+ G+L  N              I  ARA        +  G AV+ 
Sbjct: 311 GMANDLVEESRAIAERLGILVNNLVGAVDGDIATTVEISEARAKTTVIIQWSVAGLAVLI 370

Query: 588 SEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGL--KGKDEVDKGVIAIDEVNDALLK 645
           + +       K+ +  +      ++      +D  +  +G DE+ +    +    D   +
Sbjct: 371 TVLIGWWYVGKRIIGRLLRLATAMDRIAGGDLDTAIPDQGNDEISQMARTVAVFRDTARE 430

Query: 646 IKESVNESAIK--------------------------INGIKHGAQNASENTEGALKNAQ 679
            +E+    A +                          +  +   AQ A+E  +   + A+
Sbjct: 431 AREAERRVAEERERAARLKREGELSLADAFDQSVGQTVQDLGGAAQTAAERADTMDQLAR 490

Query: 680 DIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERVSEKS 727
            +   +     T+EE++  T+ + + +EE+    EE+   +   SE S
Sbjct: 491 AVMDENRGVAQTSEEMSGQTQAVAAAVEELDSAIEEILRQTTGSSEVS 538