Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 565 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  128 bits (321), Expect = 9e-34
 Identities = 115/414 (27%), Positives = 186/414 (44%), Gaps = 58/414 (14%)

Query: 300 MLALFGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTG-DELQELSDSF 358
           ++AL   LI   +     R ITKP++ + +G +   + +Y     +     E+  ++ +F
Sbjct: 196 LMALVAALILGGVGLIIARGITKPLKTVVEGLDGLADRDYRRSLDIPASRSEVGRIASAF 255

Query: 359 NKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTA 418
               E ++ L+       LE A           R    + T +A  +R+   L  A +  
Sbjct: 256 ----ERLRGLL-------LEAAE---------ERRQNAERTEQAALARKEEMLALA-SRF 294

Query: 419 VSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQES 478
            + + DL+  L    + L +    +     GAEET +Q    A+ V  AAS+ S      
Sbjct: 295 ENQIGDLVNGLGSASEALRVSASTMSS---GAEETLSQ----ASTVTAAASESS------ 341

Query: 479 SEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSI 538
                   EN + V +A EE   S +EI   +         A+ R       +DE  K++
Sbjct: 342 --------ENTQTVAAATEELASSIQEISRQASHSNAMARTAVER-------VDETNKTV 386

Query: 539 KMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIK 598
             L     ++ +V  LI DIA QT LLALNA+IEAARAG+AGKGFAVVA E+K+LA++  
Sbjct: 387 AALNSAALRVGDVVALITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKSLAQQTA 446

Query: 599 KSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKIN 658
           K+ EDI+  I+ + S    TV    +    + + +  + EV   +    E  N +  +I+
Sbjct: 447 KATEDISRQIEDIQSVTTSTV----QAISAIGESINGLSEVAGMIAAAVEEQNAATKEIS 502

Query: 659 GIKHGAQNASENTEGALKNAQDIAALSEEFTA----TAEEVTASTEELNSIIEE 708
                A+ AS    GA+    + A    E  A     AE++    +ELN+ + +
Sbjct: 503 MNIQRAEGASREVSGAISLVSEAARSGGETAADVLGAAEDLFHRNKELNTAVSD 556