Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 562 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (299), Expect = 3e-31
 Identities = 111/367 (30%), Positives = 165/367 (44%), Gaps = 41/367 (11%)

Query: 379 LANLLNNVSDVMNRVAKGDFTA------RADESRENNKLEKAINTAVSNVADLIKELREE 432
           +A  + +++ +M R+A+G+ T       R DE  +     +           L  E R E
Sbjct: 215 IAKPIVSITTIMRRLAEGERTIDIPARDRKDEIGDMAGAVEVFKDNAIRAEQLENEQRAE 274

Query: 433 LDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEV 492
                 + Q +E  L G  + A  V      VA AA++  +  Q  +   E T   A  V
Sbjct: 275 RANREKRSQTIET-LMGTFDRA--VGNVLAVVAGAATEMESTAQAMTSNAEQTSRQAIAV 331

Query: 493 YSAAEET-------VKSSEEIKEN-SEIGVE-KVENAISRMQSITNVIDELGKSIKMLGE 543
            SA EE          +SEE+  + SEIG + +  NA SR+ S          ++  L E
Sbjct: 332 SSATEEASAGVQTVASASEELAASISEIGRQVEQSNAASRLAS--EEAARASVTVSGLAE 389

Query: 544 DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED 603
              +I  V GLI  IA QT LLALNA+IEAARAGDAGKGFAVVA E+K+LA +  K+ E+
Sbjct: 390 TSTRIGTVVGLITHIANQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEE 449

Query: 604 INHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHG 663
           I+  I  V    +  V+        +   V  I+E       I  +V E A   N I   
Sbjct: 450 ISAQIGAVQQATQQAVEA-------IATIVRRIEETTHISTAIASAVEEQAAATNEIA-- 500

Query: 664 AQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERV 723
                       +N Q +AA ++E +A+   VT + +E     +++   A+ L+  S  +
Sbjct: 501 ------------QNVQRVAAGTQEVSASIGGVTQAADETGGAAQQVLSAAQSLSRESAEL 548

Query: 724 SEKSNQF 730
            E  + F
Sbjct: 549 KEMVDHF 555