Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 656 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  126 bits (316), Expect = 4e-33
 Identities = 123/475 (25%), Positives = 203/475 (42%), Gaps = 72/475 (15%)

Query: 259 ELITAYAPLLDANDDVIGMVFVGAPQTDAIAAK-NDARNKIIMLALFGILIAFLITSYS- 316
           +++T Y  L  A D++   V   A     +AA    A  + + +A+  I++  ++   S 
Sbjct: 244 DMVTTYRALQPALDELSSTVRQQAELAKTMAATARQATEQRMQIAIIAIILTVMVLGISI 303

Query: 317 NRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNL-MKTMDMD 375
            R ITKP+  L  G    G+G  D    V  G    + +D    MA  V++  +K  +  
Sbjct: 304 ARSITKPLSGLNAGIRRLGDGELDL---VLPG---LQRTDEIGDMARAVESCKLKAEERA 357

Query: 376 KLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDL 435
             E A             AK D    A + R+   +  A     +   D + E+ E    
Sbjct: 358 AAEAA-------------AKADQDRLAAQQRKGEMIALA-----AKFEDAVGEIVET--- 396

Query: 436 LNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSA 495
               +     EL+ +  T T  A+ A Q     +  S   +E+S  ++S    ++E+ S+
Sbjct: 397 ----VSSASTELEASATTLTSTADHAQQFTTLVAAAS---EEASTNVQSVASASEEMASS 449

Query: 496 AEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLI 555
             E    S +++E++ I  E V  A      +TN      + +  L E   +I +V  LI
Sbjct: 450 VNEI---SRQVQESARIASEAVTQA-----QVTN------ERVSHLSEAASRIGDVVELI 495

Query: 556 KDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRI 615
             IA QT LLALNA+IEAARAG+AG+GFAVVA+E+K LAE+  K+ + I+  + G+ S  
Sbjct: 496 NTIAAQTNLLALNATIEAARAGEAGRGFAVVAAEVKQLAEQTAKATDQISQQVGGIQS-- 553

Query: 616 EDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGAL 675
                         D+ V AI ++ + + ++ E     A  +       Q  S N   A 
Sbjct: 554 ------------ATDQSVSAIRQIGETIARMSEIAATIASAVEEQGAATQEISRNVHHAA 601

Query: 676 KNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERVSEKSNQF 730
           + A  +       +    EV        S   ++   A+ L H S R+ ++  +F
Sbjct: 602 EGAHQV-------SVNIVEVQRGASATGSASAQVLSAAQSLAHDSTRLKDEVVRF 649