Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  153 bits (386), Expect = 3e-41
 Identities = 140/564 (24%), Positives = 252/564 (44%), Gaps = 56/564 (9%)

Query: 191 LNNNNEIVDQVKADTGDEATFSLGKQ----RISTSLIE-NGKRPVGTSISDEVWTY-VMS 244
           +N +   VD+    TG  AT  +       RISTSL + +GKR +GT +  +   Y  + 
Sbjct: 108 INASKSKVDRYSNLTGGNATVFVRDGDDFIRISTSLKKADGKRALGTYLGKKHPGYGALM 167

Query: 245 QNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLALF 304
               Y+G A + G + +T Y P+     D+IG++++G   ++A+     + N++  L   
Sbjct: 168 AGKEYEGYARLFGKDYMTVYRPITGPQGDIIGILYIGFDISEALTELQRSMNQL-KLEES 226

Query: 305 GILIAFLITSYSNRKITKPIEE-----------------LKKGTEE--FGNGN----YDY 341
           G     LI +  N  I +P +E                  K+G +E  + N N    Y Y
Sbjct: 227 GYFT--LIRNVDNAIIAQPNQESGTILTEAILDGLSLDAAKRGGQESEYLNSNKEPMYAY 284

Query: 342 KTTVK---------------TGDELQELSDSFNKMAENVKNLMKTMDMDKLELANLLNNV 386
             T+                  + L+ LS +    A  V  +   + M  ++    L ++
Sbjct: 285 AVTIPGWQWTLLGQAKKRELNEESLKLLSINAGVAAVGVLLITLLLSMVLIKTLRPLRHL 344

Query: 387 SDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDE 446
              +  + KGD T   D+   +   E  ++        +   LRE +  L   +  +E++
Sbjct: 345 QHQLTELGKGDLTQEFDQVSPDTDNE--VDRITHAARQMALSLRELVGALRASVNTLEEQ 402

Query: 447 LKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEI 506
              A+E A    E A Q+  A +DQ A        +E    + ++V + A E    S+++
Sbjct: 403 ASSAQEVARLNGEEAQQLM-AQTDQIATA------IEEMSTSVRDVANHASEGASQSQQV 455

Query: 507 KENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLA 566
              S  G ++++  +  +  ++  +D    S++ + ++ + I++VT +I  IAEQT LLA
Sbjct: 456 DNASRDGHQQLDQLVQGLGKLSEQLDASHMSVENVSKESEAISQVTEVINSIAEQTNLLA 515

Query: 567 LNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGK 626
           LNA+IEAARAG+ G+GFAVVA E++ LA+  + S+ +I+ TI  +  +I+ T +   +  
Sbjct: 516 LNAAIEAARAGEQGRGFAVVADEVRTLAQRTQTSISEISQTITQLQQQIKLTAEQMGQSH 575

Query: 627 DEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSE 686
                      E    L +I  S+ E AI  + I    +  S   +   +N  +I  L+ 
Sbjct: 576 QLGTASAAQGQEAATNLNQITISIGELAIASSSIASATEQQSAVADEITRNLHEITELAR 635

Query: 687 EFTATAEEVTASTEELNSIIEEIR 710
           +    A +   + + L+ I  EI+
Sbjct: 636 DGEQRAGDTVDAAQNLSHIAAEIK 659