Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 677 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  134 bits (337), Expect = 2e-35
 Identities = 115/475 (24%), Positives = 207/475 (43%), Gaps = 52/475 (10%)

Query: 249 YKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQT-DAIAAKNDA--RNKIIMLA--- 302
           Y G   +   +++  Y  L D   +V+      A +     +A +DA  R    +LA   
Sbjct: 232 YSGLFGIFSRQMLAKYEAL-DRQQEVVAAAQAAASEALQHASAASDASVRTATWLLAGVA 290

Query: 303 ----LFGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSF 358
               + G +IAF++   + R++ K   EL         G+YD                  
Sbjct: 291 LAAMVIGAVIAFVLPRGTVRQLGKDPGELAAIARRVTEGDYDID---------------- 334

Query: 359 NKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTA 418
                           D    A +  ++ D++  + K   +A  +  R   + E+A    
Sbjct: 335 ----------------DGSPRAGVYGHIVDMVQSLKKHLASAEEESQRAREESERA--RL 376

Query: 419 VSNVADLIKELREELDLLNIQIQKVEDELKGAEE----TATQVAEAATQVAEAASDQSAK 474
               AD   E R  ++  N  +  V DE           A ++A  A QV   A  Q  +
Sbjct: 377 AMQQAD---EARTGVEAANRTMLSVADEAHAIAARIAAAAEELAAQAEQVGAGAEVQQQR 433

Query: 475 LQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDEL 534
           + E+   +        EV ++A  T +SS++ + N+E G + V   ++ ++ + +  D +
Sbjct: 434 MAETLAAITQMNGAVAEVAASAAVTSRSSDDSRRNAEEGAQVVARTVAAIEKVASGSDAV 493

Query: 535 GKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALA 594
            ++++ LG   + I +V  +I DIA+QT LLALNA+IEAARAGDAG+GFAVVA E++ LA
Sbjct: 494 SRNMQELGVKAEAIGKVMEMIADIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLA 553

Query: 595 EEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESA 654
           E   ++  ++  ++ G+       V+        V +   +  E  +AL  I   V +SA
Sbjct: 554 ERTMQATAEVGGSVRGIQDVARRNVEAVEHSVAAVGEATRSARESGEALTAIVRIVGDSA 613

Query: 655 IKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEI 709
            ++NGI   A+  S  +E   +  Q ++ ++ E     ++   +  EL+ +  ++
Sbjct: 614 AQVNGIATAAEQQSAASEQIGRTVQSVSDIAAETAGGMQQSAVAIRELSEMAAQL 668