Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

 Score =  221 bits (564), Expect = 7e-62
 Identities = 140/501 (27%), Positives = 258/501 (51%), Gaps = 35/501 (6%)

Query: 9   LGTKMLIFSIISVLVPILVFGFVANDTIAGILDDNAQKSINTDIKIADQIIESRFIEFES 68
           +GTK+LIFSII VL+PI++  +V+ DTI+ ++  N +  ++ ++ I ++ ++S  +EF++
Sbjct: 9   IGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVEFDT 68

Query: 69  ICEYATNKADVITSVSNKDSEKLSIGVETFRAAINSDFVGVLDSNGNTIASTAGPD-IQI 127
           +  Y  N   V+ +V N D + L             D     D++GN I ++ G D  +I
Sbjct: 69  MTAYTANLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGDDDAEI 128

Query: 128 GSVAQKLITSGTKRSFEPISANTAYKINKNYKVENVDSALGMVVTYPIYENGNVVGSIII 187
            S  +KL+   T  +++ +    A K + +Y+++  D AL +    PIY+  +++G++  
Sbjct: 129 SSYVKKLLEKNTIYAYDILPNEEASKYS-DYELDGHD-ALTIFTVAPIYDGDSLIGAVTY 186

Query: 188 IDILNNNNEIVDQVKADTGDEATFSLGKQRISTSLIENGKRPVGTSISDEVWTYVMSQNA 247
           +DI+N ++  VD++K  TGDEA+  L   RIST+  ++G   VG    ++++  V  +  
Sbjct: 187 VDIMNKDDYWVDRIKEVTGDEASIYLNNVRISTTCQKDGVDFVGELADEDIYETVSKKQD 246

Query: 248 VYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLALFGIL 307
           V + T  + G   +  Y+P+ + + +VIGM  VG P++      N    KI  +A   ++
Sbjct: 247 V-RSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGTPKSPFTVLLNSVIQKIFFIAFSSLI 305

Query: 308 IAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKN 367
           IA  +    N+KI   I++LK   E FG GNYD + ++ TGDEL+EL++SFNKMA+ ++ 
Sbjct: 306 IAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELEELAESFNKMADEIRK 365

Query: 368 LMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIK 427
             K +  D   L               K  F    DE +E + L+  I + VS+      
Sbjct: 366 SDKKLKSDAHTL---------------KTSF----DELKEVDNLKSEILSIVSH------ 400

Query: 428 ELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYE 487
           ELR  L  +   ++ ++D      ETA +++E   +     S+ S +L+  ++ +     
Sbjct: 401 ELRTPLTAILGYVELLKD------ETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVT 454

Query: 488 NAKEVYSAAEETVKSSEEIKE 508
              ++     + +   +E+ +
Sbjct: 455 VDNKILDIKRDKINLKKEVND 475