Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis JJ

 Score =  743 bits (1917), Expect = 0.0
 Identities = 384/728 (52%), Positives = 530/728 (72%), Gaps = 1/728 (0%)

Query: 4   INTKKLGTKMLIFSIISVLVPILVFGFVANDTIAGILDDNAQKSINTDIKIADQIIESRF 63
           + TKK+GTK+LIFSII+V++PI + G V+N+TI   + + +   + +  ++A+ I++SRF
Sbjct: 3   LGTKKIGTKLLIFSIITVIIPIAILGIVSNNTITQDMKEQSADKLESSNEMANTIMDSRF 62

Query: 64  IEFESICEYATNKADVITSVSNKDSEKLSIGVETFRAAINSDFVGVLDSNGNTIASTAGP 123
            E  ++ EYA+    V TS+   + + L +  ET ++A N+D V    + G+TIAS++G 
Sbjct: 63  TELCTLAEYASYTQGVKTSIKTGNVDDLELRAETLKSASNADLVIFTGNGGSTIASSSGE 122

Query: 124 DIQIGSVAQKLITSGTKRSFEPISANTAYKINKNYKVENVDSALGMVVTYPIYENGNVVG 183
            I + S   K+  S  K  FE I   TA K + +  V   DSAL +VV YPIY++   +G
Sbjct: 123 GITLDSTILKVSKSSEKSGFEKIPEQTALKFS-DADVTGTDSALSIVVAYPIYDDAGTLG 181

Query: 184 SIIIIDILNNNNEIVDQVKADTGDEATFSLGKQRISTSLIENGKRPVGTSISDEVWTYVM 243
            +  ID+LNN++ +VD +KA TGDE+T  L   RISTS++    R VGT+ SD V+  V+
Sbjct: 182 YVAFIDVLNNDHALVDSIKASTGDESTLFLENYRISTSVVSGNSRAVGTTASDVVYNTVV 241

Query: 244 SQNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLAL 303
            +N  + G+ANV+G   +T Y PL D+N   IGM+FVG P+       N+ARN  I++AL
Sbjct: 242 KENTEFMGSANVVGQSFLTKYVPLKDSNGATIGMLFVGTPEAQFTQMVNNARNNTIIIAL 301

Query: 304 FGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAE 363
           FG+LIA +I+  S+R ITKP+ +L+ G  +FG+GNYD+  TVKTGDEL++L+DSFNKMA 
Sbjct: 302 FGLLIAVVISLISSRSITKPLNQLEDGVHKFGSGNYDHTITVKTGDELEDLADSFNKMAN 361

Query: 364 NVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVA 423
           ++K L   +D DKL LAN L  + +VMN +A+GDF+ RADE+RE NKL+K IN A+ NV+
Sbjct: 362 DIKELHSILDADKLSLANTLKEIFEVMNHLAEGDFSIRADENRERNKLQKTINHAIENVS 421

Query: 424 DLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELE 483
            +++ L+ E+ +L+ +++ V + LK A+ET+ QV +AA QVA AA+DQSAKLQ++S++LE
Sbjct: 422 KMMENLKSEITVLSGELEDVSEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDDLE 481

Query: 484 STYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGE 543
            T + A  VY+ AE++V S+ E+K+NSE GV+KVENAI  MQ ITNVIDELGKSI+ LGE
Sbjct: 482 KTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGE 541

Query: 544 DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED 603
           + KKINEVT LIKD+AEQTGLLALNASIEAARAGDAGKGFAVVASEIK+LAEEIKKSVED
Sbjct: 542 ESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVED 601

Query: 604 INHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHG 663
           IN TI+G+N ++E T+DLGL G+DEVD+GV+AIDEVN A +KIKESV  SA  I  IK  
Sbjct: 602 INRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDN 661

Query: 664 AQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERV 723
           A+NAS NT+ AL+N QDIA++SEEF ATAEE+TAS+EE N  +EEI   AE +  +S ++
Sbjct: 662 AKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAERMMDISRKL 721

Query: 724 SEKSNQFE 731
           +E +++F+
Sbjct: 722 AEDADEFK 729