Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis JJ

 Score =  884 bits (2283), Expect = 0.0
 Identities = 469/729 (64%), Positives = 581/729 (79%), Gaps = 2/729 (0%)

Query: 4   INTKKLGTKMLIFSIISVLVPILVFGFVANDTIAGILDDNAQKSINTDIKIADQIIESRF 63
           I+ KK+GTK+L+F I+  ++P+++ G V+ D I+  ++   + S++ ++KI ++ I +  
Sbjct: 3   ISFKKIGTKILVFMILCAVIPLMIVGGVSTDKISNEMEIQGENSVDFNLKILEETINNIQ 62

Query: 64  IEFESICEYATNKADVITSVSNKDSEKLSIGVETFRAAINSDFVGVLDSNGNTIASTAGP 123
            EFE+  +Y  N   V  ++SN D+  L    E  + +   D +   D +GN I+S+   
Sbjct: 63  SEFETTTDYTANLDVVSDAISNNDNGILLNFAENMKESSEVDLIAFTDKDGNIISSSDNT 122

Query: 124 DIQIGSVAQKLITSGTKRSFEPISANTAYKINKNYKVENVDSALGMVVTYPIYENGNVVG 183
              +  +  KL+ +  + SF  IS   A K + +YKV+  + AL +    P+Y +G +VG
Sbjct: 123 QTNLKPIVSKLLGNEVQSSFLIISGAEASKYS-DYKVDKTNDALALCAVAPVYNSGKLVG 181

Query: 184 SIIIIDILNNNNEIVDQVKADTGDEATFSLGKQRISTSLIENGKRPVGTSISDEVWTYVM 243
           S+ ++DI+N +++ VD+VK  TG+EAT  L   RIST++  NG+   GT+ S+EV+T  +
Sbjct: 182 SVTLVDIVNKDDQWVDRVKQVTGNEATIFLKNVRISTTVQTNGRDATGTTASEEVYTKSL 241

Query: 244 SQNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLAL 303
           +    + GTA VLG   IT Y+P+ D   +V+GM+FVG P+   +A  N  RN+II++A+
Sbjct: 242 NHQE-HVGTATVLGQSYITKYSPIEDIEGNVVGMIFVGTPEGPFLAVINGIRNQIIIVAI 300

Query: 304 FGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAE 363
            G+L++ LI  Y+ RKITKPIEELKKGT EFGNGNYDYKT VKTGDELQELSDSFN MA 
Sbjct: 301 AGLLLSILIALYTGRKITKPIEELKKGTSEFGNGNYDYKTNVKTGDELQELSDSFNGMAG 360

Query: 364 NVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVA 423
           N+KNLMKTMDMDK+ELANLLNNV++VMN VAKGDFTARADE+ ENN L+KAINTAV+NVA
Sbjct: 361 NIKNLMKTMDMDKVELANLLNNVTNVMNNVAKGDFTARADENTENNTLQKAINTAVANVA 420

Query: 424 DLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELE 483
            LIK+LREE+DLLNIQ+QKVEDELK AEETATQV EAATQVAEA+SDQS+KLQE+S++LE
Sbjct: 421 QLIKDLREEVDLLNIQVQKVEDELKSAEETATQVTEAATQVAEASSDQSSKLQEASDQLE 480

Query: 484 STYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGE 543
           +TY  AKEVYSAAEETVKS+EEI ENSE GVEKVENAISRMQSITNVIDELGK+I+MLG+
Sbjct: 481 NTYGVAKEVYSAAEETVKSAEEISENSENGVEKVENAISRMQSITNVIDELGKAIQMLGD 540

Query: 544 DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED 603
           DGKKIN+VTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED
Sbjct: 541 DGKKINDVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED 600

Query: 604 INHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHG 663
           IN TIDGVN RIEDT+DLGLKGKDEVDKGVIAIDEVNDALL+IK SVN++AIKIN IK G
Sbjct: 601 INRTIDGVNRRIEDTMDLGLKGKDEVDKGVIAIDEVNDALLRIKGSVNDAAIKINDIKKG 660

Query: 664 AQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERV 723
           AQ+A++NTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIR IAEE+T V+ERV
Sbjct: 661 AQSATDNTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERV 720

Query: 724 SEKSNQFEI 732
           ++KS QF+I
Sbjct: 721 TKKSGQFKI 729