Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 667 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (378), Expect = 3e-40
 Identities = 136/556 (24%), Positives = 257/556 (46%), Gaps = 50/556 (8%)

Query: 191 LNNNNEIVDQVKADTGDEAT-FSLGKQ---RISTSLIE-NGKRPVGTSISDEVWTY-VMS 244
           LN +   VD+    TG  AT F+L      RI+TS+ + +G R +GT +      Y  + 
Sbjct: 108 LNASKSKVDRFANLTGGTATVFALAGDDFVRIATSVKKADGSRALGTFLGKNHPGYPTLM 167

Query: 245 QNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLALF 304
           +  +Y+G A + G + +T Y P+ D    VIG++F+G   T ++    +A NKI +    
Sbjct: 168 KGEIYEGYAKLFGKDYMTVYRPIKDMQGQVIGILFIGFEITQSLKQLQEAVNKITLEESG 227

Query: 305 GILIAF----LITSYSNRKITKPIEE-------LKKGTEEFGNGNYD---------YKTT 344
             L+      ++ ++      +P+ E       L + T+      Y          Y   
Sbjct: 228 HFLLMRKADNVLVAHPKFNTGEPVTESMLDGLTLSQATQNQAEWRYANSKNQPMFAYSQN 287

Query: 345 VK----------TGDELQE---LSDSFNKMAENVKNLMKTMDMDKLELANL--LNNVSDV 389
           V             +EL E   L  + N +      ++ T+ +  + L +L  L+ +   
Sbjct: 288 VNGWNWMLIGQVNANELNEEGLLLLTINAIVAVSGIVLITVLLSLVLLRSLKPLHALQQH 347

Query: 390 MNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKG 449
           M  +  GDF+     S  +++ E  ++   ++V+ +  ELR+ +  L   +Q +E +   
Sbjct: 348 MEIIGSGDFSHHLPPSAFDSQNE--VDKITTSVSTMSSELRQLISALQTSVQSIEQQASK 405

Query: 450 AEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKEN 509
           A+  A Q  E A    +A   Q+ ++  + EE+ ++    ++V + A+E    ++++   
Sbjct: 406 AQRIAKQNGEEA----QALMQQTDQIATAIEEMSTSI---RDVANHAQEGANQNQQVDIA 458

Query: 510 SEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNA 569
           ++ G ++    +  +  ++  ++   +++  + ++ + I++VT +I  IAEQT LLALNA
Sbjct: 459 AKEGQQQQTRLVQDLLKLSQQLNNSHQAVDKVSQESEAISKVTEVINSIAEQTNLLALNA 518

Query: 570 SIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEV 629
           +IEAARAG+ G+GFAVVA E++ LA+  + S+ +I  TID + ++++ T     +     
Sbjct: 519 AIEAARAGEQGRGFAVVADEVRTLAKRTQTSILEIGQTIDKLQTQVKTTTSQMAQSHQLG 578

Query: 630 DKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFT 689
                  +E    L +I   + E AI    I    +  S   +    N   I+ L+ E  
Sbjct: 579 IASANQGEETGHQLEEINRRIAELAISSRNIASATEQQSSVAQEITHNLHQISELANEGE 638

Query: 690 ATAEEVTASTEELNSI 705
             A E   S  EL+S+
Sbjct: 639 HRAAETVNSANELSSL 654