Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  126 bits (317), Expect = 3e-33
 Identities = 91/334 (27%), Positives = 158/334 (47%), Gaps = 37/334 (11%)

Query: 383 LNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQK 442
           L  V+  +N +A+GD             L   I+TA S+         +E+ +L     +
Sbjct: 304 LERVALALNDIAEGD-----------GDLTVRIHTANSH---------DEIGILASGFNR 343

Query: 443 VEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKS 502
             + L G     +++   A Q+   A   SA   ++S+ +E   +    V +A  E   +
Sbjct: 344 FVERLHGM---ISRMHNIAGQLEYQAKGSSASAADNSQRIEVQQDEVTMVATAVTEMASA 400

Query: 503 SEEIKENSEIGVEKVENAIS--------------RMQSITNVIDELGKSIKMLGEDGKKI 548
           +EEI  N+E   +  +NA+S               ++++ N +D  G+ I  L E  +KI
Sbjct: 401 TEEIASNAEHTAQTAQNAVSLSNHGQKQVMQSQQSIRNLANEVDTAGRIISELNEHSQKI 460

Query: 549 NEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTI 608
           N +   I  IAEQT LLALNA+IEAARAG+ G+GFAVVA E++ L++    S ++I   I
Sbjct: 461 NSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMI 520

Query: 609 DGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNAS 668
           + +       V    +  D  +  V   +  +++LL+I +++NE +   + I   A+  +
Sbjct: 521 ETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAEEQT 580

Query: 669 ENTEGALKNAQDIAALSEEFTATAEEVTASTEEL 702
             T    +N + I  +SE  +  A+     ++EL
Sbjct: 581 SVTSEINRNTESIREVSENLSIEAQSAMVQSQEL 614