Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  120 bits (300), Expect = 2e-31
 Identities = 102/361 (28%), Positives = 163/361 (45%), Gaps = 63/361 (17%)

Query: 383 LNNVSDVMNRVAKG--DFTARADESRENN--KLEKAINTAVSNVADLIKELREELDLLNI 438
           + N++D +N +AKG  D T R     E+   +L +A N  V  +  +I ++         
Sbjct: 229 IKNMADNLNDIAKGEGDLTKRLSVKGEDEIAQLGRAFNLFVDKLQHIIGDV--------- 279

Query: 439 QIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEE 498
                      A  TA +V  AA  + +     S++L   + E +       E+ S A E
Sbjct: 280 -----------ASATA-KVKTAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMSSTASE 327

Query: 499 TVKSSEEIKENSEIGVEKVENA-------ISRMQSITNVIDELGKSIKMLGEDGKKINEV 551
             +++ ++ E ++     V NA       +  + ++   I+    SIK L E  +KIN V
Sbjct: 328 VAQNTTQVAEATQAATGDVANAQRCVDASLEEIAALMEQINHAAGSIKSLSEQSQKINSV 387

Query: 552 TGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGV 611
             +I  IAEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA   + S  +IN  +  +
Sbjct: 388 LSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASTLEINEMLSAL 447

Query: 612 NSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENT 671
           +  +   V    K  DE  +  +   E + A+ +   SV  +   IN             
Sbjct: 448 HKLVSQAV----KTMDESQQSCVRSVESSRAISESLGSVTSAVTAIND------------ 491

Query: 672 EGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSE---RVSEKSN 728
                       +S +    A E ++ TEE+N  +  I+ I  EL H SE   RVS+  +
Sbjct: 492 ------------MSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEHAARVSQTVS 539

Query: 729 Q 729
           Q
Sbjct: 540 Q 540