Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  130 bits (328), Expect = 1e-34
 Identities = 112/413 (27%), Positives = 186/413 (45%), Gaps = 59/413 (14%)

Query: 320 ITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNLMKTMDMDKLEL 379
           I +P+ E     +    GN D +   +  DE+ +L  + N M   ++  M  +   + E 
Sbjct: 231 IVRPLREATGAAQGVAAGNLDIRIVEQGRDEVAQLQKALNSMVATLRTNMDDIKAKEAEA 290

Query: 380 ANLLNNVSDVMNRVAKGDFTARADESRENNKL--EKAINTAVSNVADLIKELREELDLLN 437
               N  +DV    A+     +ADE+R        + + TA S +  ++K +      L 
Sbjct: 291 ----NRQADVARDAAR-----QADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLE 341

Query: 438 IQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTY-ENAKEVYSAA 496
              ++  D  +G +    ++ E AT +               EE+ +T  E A+    AA
Sbjct: 342 ---RRAGDIDRGTDNQLARIGETATAM---------------EEMNATVLEVARNAGRAA 383

Query: 497 EETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIK 556
           E+T  S    +  +E G E V   +  M+ +  +   L  ++  LG+  + I  V  +I 
Sbjct: 384 EQTDSS----RAQAENGAEMVSRTVKAMEDLKQLATGLKDNMHRLGQQSEAIGHVMNVIN 439

Query: 557 DIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIE 616
           DIA+QT LLALNA+IEAARAG+AG+GFAVVA E++ LAE+   + +++  +I  +     
Sbjct: 440 DIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMGATKEVGDSIRAIQGLAR 499

Query: 617 DTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALK 676
             V       D +D+ V AI    D   ++  S  +   +I    H A            
Sbjct: 500 TNV-------DSMDEAVSAI----DGAARLSSSSGDLLKEIVRTAHDAAG---------- 538

Query: 677 NAQDIAALSEEFTATAEEVTASTEELNSII----EEIRVIAEELTHVSERVSE 725
             Q I A +EE +A +EE+T S E++N I     E IR    ++  ++E+  E
Sbjct: 539 QVQAIVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAEE 591



 Score = 39.3 bits (90), Expect = 6e-07
 Identities = 49/245 (20%), Positives = 102/245 (41%), Gaps = 37/245 (15%)

Query: 318 RKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELS----DSFNKMAENVKNLMKTMD 373
           R   +  E+      +  NG      TVK  ++L++L+    D+ +++ +  + +   M 
Sbjct: 377 RNAGRAAEQTDSSRAQAENGAEMVSRTVKAMEDLKQLATGLKDNMHRLGQQSEAIGHVM- 435

Query: 374 MDKLELANLLNNVSDVMNRVAKGDF--TARADESR--------ENNKLEKAINTAVSNVA 423
                  N++N+++D  N +A       ARA E+         E  KL +    A   V 
Sbjct: 436 -------NVINDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMGATKEVG 488

Query: 424 DLIKEL----REELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESS 479
           D I+ +    R  +D ++  +  ++    GA   ++   +   ++   A D + ++Q   
Sbjct: 489 DSIRAIQGLARTNVDSMDEAVSAID----GAARLSSSSGDLLKEIVRTAHDAAGQVQ--- 541

Query: 480 EELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIK 539
               +    A+E  +A+EE  +S E+I   +    E +  A + ++ +    +EL + I 
Sbjct: 542 ----AIVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRDLAEQAEELHQLIN 597

Query: 540 MLGED 544
            L  D
Sbjct: 598 ALKND 602