Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 801 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  124 bits (312), Expect = 1e-32
 Identities = 82/305 (26%), Positives = 155/305 (50%), Gaps = 21/305 (6%)

Query: 432 ELDLLNIQIQKVEDELKGAEETATQVA-----------EAATQVAEAASD---QSAKLQE 477
           ++  L  Q Q++E +     E AT+             E A QV EA++    Q A+  E
Sbjct: 495 DITALRQQQQRIEAQRDAMAEVATEADGIARDLNAAANELAAQVREASNGSDVQRARTTE 554

Query: 478 SSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKS 537
           ++  +E       EV  +A    +++E  ++ ++ G   V + +  ++++  +  EL +S
Sbjct: 555 TATAMEQMNATVLEVAQSAGHAAENAENARKKADEGARLVGDVVEAIEAVREMALELQQS 614

Query: 538 IKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEI 597
           ++ L  + + I  +  +I+DIA+QT LLALNA+IEAARAGDAG+GFAVVA E++ LAE+ 
Sbjct: 615 MQGLATEAEGIGHIMQVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT 674

Query: 598 KKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKI 657
             +  ++   I  + +   ++++      + V    +      +AL  I + V+++A ++
Sbjct: 675 MNATREVGQAIRNIQTGARNSMEATSNAVEAVVASNMLTTRSGEALSSIVKMVDDTADQV 734

Query: 658 NGIKHGAQNASENTEGALKNAQDIAALSEEFTAT-------AEEVTASTEELNSIIEEIR 710
            GI   ++  S  +E   +  ++I A++E    T        +++T    +L  +IE+IR
Sbjct: 735 RGIATASEQQSAASEQISRATEEITAIAEVTAQTMNRSSDAVQQLTRLAGDLGGLIEQIR 794

Query: 711 VIAEE 715
               E
Sbjct: 795 TGTSE 799



 Score = 61.2 bits (147), Expect = 2e-13
 Identities = 123/571 (21%), Positives = 227/571 (39%), Gaps = 91/571 (15%)

Query: 198 VDQVKADTGDEATFSL---GKQ-RISTSL-IENGKRPVGTSISDEVWTY-VMSQNAVYKG 251
           V + K  TG E T  +   GK  R++T++   +GK  +GT I  E   Y  + +   Y G
Sbjct: 120 VGRQKRVTGSECTIFVKVPGKLVRVATTVHTADGKPAIGTYIPAESPVYQAIEKGQEYVG 179

Query: 252 TANVLGTELITAYAPLLDANDDVIGMVFVGAPQ-----TDAIA-AKNDARNKIIMLALFG 305
            ANV+G   +T Y P+ DA       +F G P      T+  A AK        +L   G
Sbjct: 180 VANVVGQPFLTHYRPIRDARGQFTIALFAGVPLLQPSFTEMFAGAKVGGAGYTFILDETG 239

Query: 306 ILIAF---LITSYSNRKITKPIEELKKGTEEFG-NGN-----YDYKT------TVKTGDE 350
             +A    + T+ ++    K + E + G  E+  NG+     ++Y           T DE
Sbjct: 240 KRLAHPTRVGTNVNDDSYGKRLMETRNGFVEWEYNGSKVGYLFEYAPWKLRFGVAMTHDE 299

Query: 351 LQELSDSFNKM--------AENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARA 402
           +   +D+  +M        A  + +    + +   E+   +  +S     V+ GDF+AR 
Sbjct: 300 MLRGADADVRMWAAGCAVVAVAIASFFVLLLV--REVTRPMQRLSAYAAAVSAGDFSARM 357

Query: 403 DESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAAT 462
           D   ++     AI   +  V  ++ E++ +L L    +  +        +T  +V    T
Sbjct: 358 DYPADD-----AIGRTIGAVNGMVAEMKTKLGLTQGVLNGMTLPF-AVCDTDAKVIHTNT 411

Query: 463 QVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAIS 522
            + +           + + L+        VY   +E + ++  ++E   +   +V+   S
Sbjct: 412 ALIDLLQRPGTPADWTGKPLDIL------VYGQTKEDMATARCLREGCALRNIEVDLTTS 465

Query: 523 RMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKG 582
           + +++  ++D    S      DG  I   T      A+ T L      IEA R  DA   
Sbjct: 466 KGETVHTLVDVAPLS----DLDGSLIGSFT----IYADITALRQQQQRIEAQR--DAMAE 515

Query: 583 FAV----VASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDE 638
            A     +A ++ A A E+   V + ++  D   +R  +T                A+++
Sbjct: 516 VATEADGIARDLNAAANELAAQVREASNGSDVQRARTTET--------------ATAMEQ 561

Query: 639 VNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTAS 698
           +N  +L++ +S              A +A+EN E A K A + A L  +     E V   
Sbjct: 562 MNATVLEVAQS--------------AGHAAENAENARKKADEGARLVGDVVEAIEAVREM 607

Query: 699 TEELNSIIEEIRVIAEELTHVSERVSEKSNQ 729
             EL   ++ +   AE + H+ + + + ++Q
Sbjct: 608 ALELQQSMQGLATEAEGIGHIMQVIEDIADQ 638