Pairwise Alignments

Query, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 657 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (332), Expect = 6e-35
 Identities = 103/365 (28%), Positives = 177/365 (48%), Gaps = 46/365 (12%)

Query: 350 ELQELSDSFNKMAENVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESREN- 408
           E Q     F  +A ++  L++T D         L +V+ V+  +A+GD T R     E  
Sbjct: 285 ETQGKQGFFLMLANSLNALIETSDRG-------LQDVARVLMALAEGDLTTRIYNDYEGT 337

Query: 409 -NKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEA 467
            N L+   N     ++ +I+++++  D +N                      A++++A+ 
Sbjct: 338 FNDLKNYSNQTAEKLSYMIRDIQKAADTINT---------------------ASSEIAQG 376

Query: 468 ASDQSAKLQESSEELESTYENAKEVYSAAEETVK-SSEEIKENSEIGVEKVENAISRMQS 526
            +D S++ +E +  LE T  + +E+      TVK +++   + + +  +  + A+   + 
Sbjct: 377 NADLSSRTEEQASSLEQTSASMEELTG----TVKLNADNASQANALASKAADVAVDGGEL 432

Query: 527 ITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVV 586
           I  V+  +      + E  +KI ++ G+I  IA QT +LALNA++EAARAG+ G+GFAVV
Sbjct: 433 IQQVVQTMAS----INESARKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVV 488

Query: 587 ASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKI 646
           ASE+++LA+    + +DI   I    ++IE    L  K  D + + VIAI  VND + +I
Sbjct: 489 ASEVRSLAQRSANAAKDIKALISDSVTKIESGNSLVGKSGDTMKEIVIAIKRVNDIMAEI 548

Query: 647 KESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSII 706
             + NE AI I+ I        E T       Q  AAL EE  A AE + +  ++L   +
Sbjct: 549 ASASNEQAIGIDEISKAVVQMDEMT-------QQNAALVEEAAAAAESMQSQAQQLADSV 601

Query: 707 EEIRV 711
               V
Sbjct: 602 ANFTV 606



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 27/151 (17%), Positives = 66/151 (43%), Gaps = 7/151 (4%)

Query: 380 ANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQ 439
           A + + V  +  R A      +A  S    K+E   N+ V    D +KE+   +  +N  
Sbjct: 486 AVVASEVRSLAQRSANAAKDIKALISDSVTKIESG-NSLVGKSGDTMKEIVIAIKRVNDI 544

Query: 440 IQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEV------Y 493
           + ++            ++++A  Q+ E     +A ++E++   ES    A+++      +
Sbjct: 545 MAEIASASNEQAIGIDEISKAVVQMDEMTQQNAALVEEAAAAAESMQSQAQQLADSVANF 604

Query: 494 SAAEETVKSSEEIKENSEIGVEKVENAISRM 524
           +  E+T  + + +    ++ V++  + ++RM
Sbjct: 605 TVDEDTSAAPKSVASTKKLAVKQPPSTVTRM 635