Pairwise Alignments

Query, 258 a.a., serine protease from Methanococcus maripaludis S2

Subject, 508 a.a., Peptidase S1C, Do (NCBI) from Rhodospirillum rubrum S1H

 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 48/171 (28%)

Query: 28  TPAGTGFFISPEGWFVTAAHVVMDKKGYLRKDLDRAFLIKEQNAKDPKKICQYVSPGPIF 87
           T  G+GF +   G+ VT  HV+ D         D   +  E   KD K            
Sbjct: 113 TSLGSGFIVDAAGYIVTNNHVIQDADEITVILHDDTAIKAELVGKDEK------------ 160

Query: 88  PGLDIALLKVDFEKNSDKEWLNKKTEFPFIKVSTGRLE---MGDEVYSFGYPLSSYGIIK 144
              D+ALL++             KT+ P   V  G  E   +GD V + G P        
Sbjct: 161 --TDVALLRI-------------KTDKPLTAVPWGNSEAARVGDWVMAIGNPFG------ 199

Query: 145 PGEIGYTKLSPRVTSAIISSNFDTNMGATGPKNYVL--DKALNYGNSGGPI 193
                   L   VT+ IIS+   T     GP +  +  D A+N GNSGGP+
Sbjct: 200 --------LGGTVTAGIISAK--TRDINAGPYDSFIQTDAAINKGNSGGPL 240