Pairwise Alignments

Query, 646 a.a., PEGA domain-containing protein from Methanococcus maripaludis S2

Subject, 752 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  259 bits (662), Expect = 3e-73
 Identities = 203/712 (28%), Positives = 328/712 (46%), Gaps = 115/712 (16%)

Query: 3   KRSIVFLLLLLSVLGSVSAETPTIPETCTTTNFYVVLTDTSMTTELTTAQLGAMDFGLSA 62
           K   +FLLLL+  +GSVSA T TIPET +T+ +YV+  D ++T +L  + + A DFG+ A
Sbjct: 3   KSFFLFLLLLIGCIGSVSAVTCTIPETGSTSGYYVLFADDTLTWDLINSTMSAYDFGVYA 62

Query: 63  PSISGVENNWIYFSSKSDLARFCSIISYSSPTMPFSGAFSVYVDGHFSPMTVIKLNAATT 122
           PSI+G++   +YF+SK+DLARFCS++SY++  +PF+G F VY+DG  +PMTV+ ++    
Sbjct: 63  PSITGIDGPKMYFASKNDLARFCSVVSYTNKVIPFNGDFDVYIDGILTPMTVLLIDGQAY 122

Query: 123 GSYTSNII----TNASNSQMIYVYSQTSNSLYAGETL--GNNGVQFFYVSGGSTA----A 172
             Y S++      + S +Q  Y+YS   +    G  L    NGVQ FY  G ST     +
Sbjct: 123 TPYASDMYQDFDIDTSKTQYGYMYSYVHSDYSGGNYLKISLNGVQLFYAGGESTTYYYDS 182

Query: 173 QLTQFDELVALTNNNNISYYVHGGGSDRYARIMSTIVYFDYVDYSTTGTMS---LNAVEL 229
            +   D  + +   N     +HG     Y +  ++IV FDYVDYST   ++       E+
Sbjct: 183 AVFPADSTMRIAWTN-----LHG-----YQKTTTSIVLFDYVDYSTYSAVNRTDFTISEI 232

Query: 230 YSPPEQGNVSIYSDAD-TQIYEGTYLLGTTDNGGLLDVQLPMGKHTLKFVKDGYWDVLKT 288
           Y+PP +   +  S+ D  ++++    LGT DN G     L  G H L F+KDGY++V +T
Sbjct: 233 YTPPARYVATFDSNVDGIEVFDSGNSLGTFDNLG--TAYLTDGTHYLTFLKDGYYNVTQT 290

Query: 289 VTVSAENNSEIYVSMAPRNAIFQVEKEFSGNIYPNSVASLSMDVTP-------------- 334
           V V   + S++ VS+        VE   + +     +AS+SM +                
Sbjct: 291 VIV---DGSDLTVSVDMETTHLPVELTLTNS--EGGLASVSMYIDDELVNTVSNGQTVQL 345

Query: 335 ---------VKTAYATKLRVSGVELS-----------KVYYNTQE--------------- 359
                    VK+ Y  + R   ++ S            V Y+ Q                
Sbjct: 346 PRGSHLFKFVKSGYWNETRTLNIDESFDSLDIRFYPLSVMYSIQVPTDINTFKNSEVPVT 405

Query: 360 ---LPKAADGS---YIIG-------DISSTQ-----------------QIVIDFKTTSSW 389
               PKA   S   Y+ G       D S+TQ                  I I F +  + 
Sbjct: 406 VTISPKAMSSSTKIYLSGKEVLDVRDSSNTQIPYVNGGYLIGDISVPTDITIKFMSGETL 465

Query: 390 GERAFTVELSATDIEGTTYTNLETINYNVLELPFLFETPDTWAIGVNDVILTDMSGESYS 449
           G  A  + +      G +Y    +  Y V++LP     P  W IG N++ +++  GE+  
Sbjct: 466 GTNALQMRVMGYGTLGQSYVTDTSFTYEVVQLPLTLTVPSKWNIGSNNLRISETEGENRL 525

Query: 450 VLMVLYDESGTEKWSSSTNLLEYCDYTFEVPIEDAGEYTLELNAKSGTVKSYYSIEIIEP 509
           V++ + D      +S S     Y  + FE+  E+ G+Y + +      + SY +IE++ P
Sbjct: 526 VMIQVEDAENNIVYSDSYAFSGYESHDFEITFEETGDYRVRI-LSGDLINSYLNIEVVNP 584

Query: 510 VSLVSDFLTAASGNVATVQFKISNPTESVKYYTAELTCPFFNNTVDKTFSIAPGTVEKTV 569
           +      +T   G  +++   I N   S +YY  E++    +      FS++PG V K+ 
Sbjct: 585 ILFSQTTITGKPGTASSLSVNIQNLFTSPQYYKVEISGDGLSEPSITEFSVSPG-VTKSQ 643

Query: 570 DISFEVPEGLELEYYQLTLEVF---NEGDTDPIYSGNVVLTISSSSLFLASV 618
            +   V E L  + Y LT  V+   + G  + I   +++L I S+ L +  V
Sbjct: 644 TLLVPVGENLTFDSYLLTATVYLKDSNGIYENILEESIILNIDSTGLSVGGV 695