Pairwise Alignments

Query, 676 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 686 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  148 bits (373), Expect = 9e-40
 Identities = 148/566 (26%), Positives = 251/566 (44%), Gaps = 88/566 (15%)

Query: 112 EELAGYRQYSEESAAKDIAEIKDKLESGIGTY---SFKTSGTLSDVSVSMKGPDKIYGFS 168
           E + G ++ S   A+     I D+++S + +Y    ++  G + +V   +  PDKI GFS
Sbjct: 86  EAVMGDKEQSIIEASNSTQRILDEIKSDMVSYYCVGYEVGGLVQEV---INAPDKIGGFS 142

Query: 169 AFPVQLKF-----------------DEALTGSESSYVKIESVKIYLVDSDGVKWNERTYS 211
            FPV++                   D+  T     + +I SV   ++    V    +   
Sbjct: 143 VFPVRITVKTPSIDSMFPEDVIDYGDDQYTIDVIGHTEINSVTFKVMQGGTVV--SKYEL 200

Query: 212 DDIKLQEESNDYPDAIEEYILNFTMKAPDPYIGKAKSQVTNAPNREI--LQELINAEVKE 269
            D+ +  E+       +E+  +  +K PD Y  +  + +T   N ++  L  L+ A+V+ 
Sbjct: 201 TDLNITSEN-------QEHTFDAILKVPDDYASEV-AVMTQGGNLDLNDLNALVTADVEN 252

Query: 270 FELVVEIDGYAKLYKEESGYKLDPITGLEVWKTWEEYDKTITIDT---------KLT--- 317
           FE+  E++    ++KE + +       LE     EE DK +  D          K T   
Sbjct: 253 FEIYTEVNHNLVVWKENAEWAR---WDLEEHTPEEEEDKPLRWDDDDDGKDDPWKNTSYI 309

Query: 318 ----TLEAWDRIHNGVYYVDGADGSLPTKFVNEVTP--IAYSSYANGATSNIIGRCWASP 371
               T  A   I +G+    G +G L +++ ++      A+ + ANGATSNI+    +S 
Sbjct: 310 SYRHTTSATQSILDGIVDHKGKEGGLGSEYRDQYDDEMFAFKADANGATSNIVMTIKSSM 369

Query: 372 VHCYNSSAQYKFILVGQPENLEPVPVTIE---DDYRALVLKLRDDGVATIA--SETPGNF 426
           +H  N+ A Y   ++G PE  +     ++     YR + +    DG +TI+  S++ G  
Sbjct: 370 IHELNNPAGYSVTIIGYPEYFDTYSTDMKIQNVSYRLVAINYHADGTSTISTDSKSDGIL 429

Query: 427 HDMAVHNGVTTSLNYLKDDSTEAFETYFIV---IADVDDDIDSALPVWCIIQPRISVIDN 483
            D+     + T L+Y  D+ T A   + +V   I   +D+ D + PVW I +PRI++  N
Sbjct: 430 PDLTKVGVINTILDYNSDEDTVAIYPFLLVSGRIYQTEDNPDRSFPVWAISKPRITIRSN 489

Query: 484 VKYSLSEEFKEEILELLSDGSISDSDTERITEIIEISENSLKEKQYVAEIESEK-YDDNE 542
             + +++  K  I   L+DG  + S+ E+   + E        K  +AE+ES + + D+ 
Sbjct: 490 YVFVITDHSK-LIDSFLADGDFTASEKEQTEAMFEGDVADYLSK--IAELESNRDFADDT 546

Query: 543 KARNAISNALEDYEKAFEYYEKA---------KNTDDPEEVKVYTYLAGDIYEPAGDYWK 593
            + NA       Y+KA +YY+KA          NTD   E K   +     YE     W 
Sbjct: 547 DSENA-------YQKAIDYYQKAIDSLTAISLTNTDSIIEGKNKAW----YYESQAKDWV 595

Query: 594 EAAEKYNLGLDDQGDALASNAEKLES 619
           + AE Y  GLDDQ   LAS  E+  S
Sbjct: 596 QIAELYYYGLDDQALTLASTTEEANS 621