Pairwise Alignments

Query, 246 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 243 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  406 bits (1043), Expect = e-118
 Identities = 198/240 (82%), Positives = 217/240 (90%)

Query: 5   KNNIWIGLAVAVILVAAGAWYYLDKDDTGGIIIPTGTTFSSDAAFDNEIGDVLITFNASK 64
           KNNIWIGLA+AVILVAAG WYYL +DD GGII+PTGTTFSSDA F++E GDVLITFNASK
Sbjct: 3   KNNIWIGLAIAVILVAAGTWYYLSQDDAGGIIVPTGTTFSSDAVFNSETGDVLITFNASK 62

Query: 65  ENITADSLELYVSYDEVTFTKTNTFEDVSFPLDIEVTAEDGEENLYYYAVVSYSGKTYRL 124
           ENITADS+ELYVSYDEVTFTKTNTFEDV+FP+D+EVT E+GEENLYYYAVVSYS KTYRL
Sbjct: 63  ENITADSIELYVSYDEVTFTKTNTFEDVAFPIDVEVTPEEGEENLYYYAVVSYSDKTYRL 122

Query: 125 PESAGAYETVEITVETTTVEIVDPLTFAAVPDFNSTTSVVLFSLSASEDNKTADVVLFTS 184
           P  AG+YETVEI V  TT E  D LTF AV DF++TT +VLFSLSASEDNKTADV+LFTS
Sbjct: 123 PTDAGSYETVEIIVSNTTEENTDLLTFTAVSDFDNTTGIVLFSLSASEDNKTADVLLFTS 182

Query: 185 YDNTTFTNTVNSTALELPGTFEFTANGTETDLYYYLEIVCDDDTSRLPAEGAEWINITVA 244
           YDNTTFTNTVNSTAL+LPGTFEFTA+  ETDLYYYLEIVCD +TSRLPAE AEWINIT+A
Sbjct: 183 YDNTTFTNTVNSTALDLPGTFEFTADAAETDLYYYLEIVCDGNTSRLPAESAEWINITIA 242