Pairwise Alignments

Query, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 258 a.a., putative amino-acid ABC transporter, periplasmic solute-binding protein from Phaeobacter inhibens DSM 17395

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 6/223 (2%)

Query: 29  NQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSELLDAVSEGE 88
           +  L VG+     P +++     +GFEV+++  +++   L+ EFV  SFS L+ A+    
Sbjct: 24  SDTLRVGMSGGYFPFTFVRQDVLQGFEVDVMNAVAEETGLEVEFVTMSFSGLIGALESDR 83

Query: 89  VDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVR--SDSNCVGIKCLENKSVGVLKDSIE 146
           +D     I  TPER  K  F++ Y    + ++V+  ++ +  G   L  K+V V   S  
Sbjct: 84  IDTIANQITITPERSAKFAFTQAYVIDGAQVVVKRGNEDSIAGPADLAGKTVAVNLGSNF 143

Query: 147 EYWLESLLKSMDFKIIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDK 206
           E  L  L ++   +I  YE   +I  D   G++D+ V D ++S  LIQ+    L + G  
Sbjct: 144 EQLLRELPQADKIEIKTYE--ANIAQDTALGRVDAFVMDRVSSAQLIQESPLPLALAGAP 201

Query: 207 FDIIYVAIAIDN--TNPELKKSIDVALLEMENDGTLVKLKEKW 247
           F  I  A+       +  L+  +D AL  +   G L ++ +KW
Sbjct: 202 FSEIRNALPFRQGADSLALRDRVDTALTTLREGGKLAEISQKW 244