Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 179 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

 Score =  153 bits (387), Expect = 1e-42
 Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 1   MIIGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIV 60
           M IGYARVS  DQ L+ Q D L  AG E+IF +K+SG K +RP  D+     R GD+++V
Sbjct: 1   MKIGYARVSRDDQQLDLQHDALTAAGCERIFSDKMSGAKASRPGLDEALAFARPGDVLVV 60

Query: 61  TELTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAHGKLLFTIFAGLAEFERDLI 120
             L R+ RS  +L+ +  + ++ GV ++SLKE  +DTTSA G+L+F +FA +AEFER+LI
Sbjct: 61  WRLDRLGRSMSELLRLTANLEASGVGLESLKEQ-IDTTSAAGRLVFHVFAAMAEFERNLI 119

Query: 121 SERVKSGLNAARSRGRLGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYNY 179
            ER  +GL AAR+RGR GGRP +  E +     +   +  T  +I KA  IS+ TLY Y
Sbjct: 120 RERTFAGLEAARARGRQGGRPGVPPETIAAIQALAGDQNRTPDEICKALKISRSTLYKY 178