Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 180 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

 Score =  103 bits (257), Expect = 2e-27
 Identities = 58/177 (32%), Positives = 105/177 (59%), Gaps = 10/177 (5%)

Query: 3   IGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIVTE 62
           +GY RVST DQN ERQLD L     +K+F +K SG   +RP    + + +R GD ++V +
Sbjct: 4   VGYVRVSTVDQNTERQLDGLTL---DKVFEDKCSGKDAHRPALQALIEYVREGDTVVVHD 60

Query: 63  LTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDTTSAH--GKLLFTIFAGLAEFERDLI 120
           ++R++R+ +DL+ +V++    GV ++  KE    T  A+   +L+ ++   + +FER ++
Sbjct: 61  ISRMARNLEDLLSLVKAFNKRGVAVRFNKEGLSFTGEANPMQELMLSMLGAVYQFERSMM 120

Query: 121 SERVKSGLNAARSRGRL-GGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTL 176
            ER + G+  A+  G+  GGRP++D+E ++ AL        +I++  +A G+   T+
Sbjct: 121 LERQREGIQQAKQAGKYRGGRPRVDAEAIKAAL----DSGLSIRKAAEALGVGISTV 173