Pairwise Alignments

Query, 184 a.a., recombinase family protein from Methanococcus maripaludis S2

Subject, 186 a.a., site-specific recombinase, DNA invertase Pin from Dechlorosoma suillum PS

 Score = 99.0 bits (245), Expect = 4e-26
 Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 3   IGYARVSTKDQNLERQLDELKKAGSEKIFLEKISGTKRNRPEFDKMFDILRAGDIIIVTE 62
           +GY RVST+DQN  RQL+ ++     K F +++SG   NRP   +    LR GD + +  
Sbjct: 8   VGYIRVSTEDQNTARQLEGVELT---KTFTDRLSGKDTNRPALKECLAYLREGDTLHIHS 64

Query: 63  LTRISRSTKDLVEIVESCKSLGVEIKSLKESWLDT--TSAHGKLLFTIFAGLAEFERDLI 120
           L R++R+  DL  I++     GV +++ KE  L T   S    LL ++   +AEFER +I
Sbjct: 65  LDRLARNLDDLRGIIKGLTGRGVAVRAHKEGLLFTGDDSPMANLLLSMLGAVAEFERSII 124

Query: 121 SERVKSGLNAARSRGRLGGRPKIDSEKVEMALKMYDSKEYTIKQILKATGISKFTLYNYL 180
            ER + G+  A+ +G   GR    SE+  + LK   +       + K   +S+ ++YNYL
Sbjct: 125 KERQREGIAIAKQKGVYKGRKASLSEEQVVELKALAASGEKKAALAKRYRVSRASIYNYL 184