Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas fluorescens FW300-N2E2

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 14/157 (8%)

Query: 156 RDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDY 215
           RD  ++ VL+  G R +E +S+  +  +  +G  R+   K  +ER V + EE +  V  Y
Sbjct: 135 RDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMG-KGSKERLVPMGEEAIVWVERY 193

Query: 216 IK----ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIVIH 271
           ++    E +    +D +F +   +   R         + +   + K  G+    K +  H
Sbjct: 194 MRDARHELLGGRPSDVLFPSLRGEQMTR------QTFWHRIKHQAKVAGI---NKSLSPH 244

Query: 272 SLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
           +LRH  AT LL+ G  + VV+ +LGH  L TT  Y+H
Sbjct: 245 TLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH 281