Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 299 a.a., tyrosine recombinase XerC subunit from Pseudomonas syringae pv. syringae B728a

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 61/286 (21%), Positives = 126/286 (44%), Gaps = 22/286 (7%)

Query: 26  YIKKFQEEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNNRRN 85
           Y    + ER+   + P T++     L   LA+C++     +S      +  F    +++ 
Sbjct: 8   YCMHLRSERQ---VSPHTLEAYRRDLGKVLAYCQKAQVSSWSDLDIQHLRSFTARQHQQG 64

Query: 86  CTVRTQNRYFNLLKVFYRLLKYVNFKEF-ERESIERKRFSKFEKKHYDTINFDTYNRIIK 144
            + R+  R  + ++ FY   KY+N +   + +        K E++   T++ D   +++ 
Sbjct: 65  QSSRSLARMLSAVRGFY---KYLNREGICQHDPANGLSPPKGERRLPKTLDTDRAAQLLD 121

Query: 145 EIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVI 204
             +  +     RD  I+ +L+ +G R SE   +     D   G  ++   K  + R + +
Sbjct: 122 GGVEDDFLAH-RDQAILELLYSSGLRLSELTGLNLDQLDLRDGLVQVLG-KGSKTRVLPV 179

Query: 205 AEETVEIVRDYIK-ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVR-KLKEEGVI 262
             +  + +  ++    +    +D +F +   Q GKR+          +A++ +LK  G  
Sbjct: 180 GSKARQALEVWLPLRALTNPQDDAVFVS---QQGKRLG--------PRAIQVRLKAAGER 228

Query: 263 PEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
             G+ +  H LRH  A+ LL+    +  V+E+LGH  ++TT  Y+H
Sbjct: 229 ELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTH 274