Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 187 a.a., site-specific integrase from Synechocystis sp000284455 PCC 6803

 Score = 69.7 bits (169), Expect = 5e-17
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 9/158 (5%)

Query: 156 RDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDY 215
           RD L+  +   TGCR  EA S+ + D   +   FRI  TKT   RTV I      +  +Y
Sbjct: 29  RDRLLFGICLYTGCRIGEACSLAWADVTTDAMTFRIEKTKTKSSRTVAITPALQVLFDEY 88

Query: 216 IKENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIVIHSLRH 275
            ++   R S+ Y+F+ + +  G  +       + K A  +++  GV         HS R 
Sbjct: 89  RQQQCFRFSSSYVFRGKRV--GSHLHPSMAHKILKAATDRIEVRGV-------STHSFRR 139

Query: 276 GRATDLLDKGVPIDVVKEILGHRSLETTLYYSHSKERK 313
              T +  KG+ + V+++I GH++L    +Y    E++
Sbjct: 140 TALTMMCRKGINLRVIQKISGHKNLNVLSHYLEVSEQE 177