Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 320 a.a., integrase/recombinase from Synechococcus elongatus PCC 7942

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 17/247 (6%)

Query: 84  RNCTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRII 143
           R     T NR    LK   R  + +    F  E ++  R   +     DT    T  R  
Sbjct: 84  RGLAEATINRRLAALKSLVRFSRRLGRCTFSLEDVKGDRVQSYR----DTTG-TTPERFR 138

Query: 144 KEIILSNSRTR--LRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDT-KTYEER 200
           + + L N +T    RD  I+R+LWE   RRSEA+  R +D +    R  I    K  +  
Sbjct: 139 ELLALPNRQTAKGARDYAILRLLWENALRRSEAVQTRVQDLEQGDRRLWILGKGKGRQRL 198

Query: 201 TVVIAEETVEIVRDYIKENIKRDSNDYIFQN-EMIQNGKRVKLDWITNVFKKAVRKLKEE 259
            V ++ E V+ ++D+++ + K +    +F   +    G+++    +  + K++   +K  
Sbjct: 199 PVSLSVEMVQALQDWLRWHPKAEPEQPLFTALDRRSYGQQLSDQAVYLLVKRSAEAIK-- 256

Query: 260 GVIPEGKRIVIHSLRHGRATDLLD-KGVPIDVVKEILGHRSLETTLYYSHSKERKNG-ML 317
                GKR+  H +RH   T  LD  G  I +V+++  H  LET   Y  +++   G   
Sbjct: 257 ----LGKRLSPHRIRHSAITAALDATGGNIRLVQKLSRHSRLETLQRYDDARQDFQGECT 312

Query: 318 DNIQKLL 324
           +++ KLL
Sbjct: 313 EHLAKLL 319