Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 304 a.a., phage integrase family site specific recombinase (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 15/194 (7%)

Query: 23  QNIYIKKFQEEREFDNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLTTHDFVIFFNMLNN 82
           Q+ +++  +EE        ST K  +  +K F+ F  +  + P  +   +   F   + N
Sbjct: 4   QSPFLQGIREEMRMRGYSISTGKTYLYWIKAFIRFHHK--RHPVEMGQAEVAQFLTFIAN 61

Query: 83  RRNCTVRTQNRYFNLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRI 142
           +RN  + TQ    N L   Y    +            ++RF          +  D   RI
Sbjct: 62  QRNVAINTQKTALNALVYLYHKHLHQELGSLGFHYSSKQRFQPV------VLTADEVKRI 115

Query: 143 IKEIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTV 202
           +  +         R  LIV +L+ +G R SE L +R +D D E     +RD K  ++R  
Sbjct: 116 LNCL-------EGRSRLIVEILYGSGLRISECLRLRVQDVDLEHLSLTVRDGKGRKDRKT 168

Query: 203 VIAEETVEIVRDYI 216
           ++++     ++ YI
Sbjct: 169 LLSQHCATALQSYI 182