Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 307 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 24/284 (8%)

Query: 37  DNIKPSTIKNDVTSLKVFLAFCEEIGKEPYSLT-THDFVIFFNMLNNRRNCTVRTQNRYF 95
           D + P+++    + L+ +  + ++ G+ P +     D   F   +  R   +  +Q RY 
Sbjct: 28  DGLSPNSLAAYRSDLQRYALWLQQQGRPPLAQAGAADLAAFLADVAARMKSS--SQARYL 85

Query: 96  NLLKVFYRLLKYVNFKEFERESIERKRFSKFEKKHYDTINFDTYNRIIKEIILSNSRTRL 155
           + L+ FYR L   N     R S +    +    K        +  ++   +      T L
Sbjct: 86  SSLRRFYRRLLAQN-----RISADPTLQTAMPVKASRLPKVMSEAQVEALLAAPEIETPL 140

Query: 156 --RDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVR 213
             RD  ++  L+ TG R SE ++++  +  F+ G  R+   K  +ER V + E  ++ ++
Sbjct: 141 GQRDRAMLETLYATGLRVSELVNLKLHEVSFDMGVARVFG-KGSKERLVPLGEVALDWLK 199

Query: 214 DYIKEN----IKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIV 269
            Y+ +     +    +D++F   +   G  +       + KK        G+ P   R+ 
Sbjct: 200 SYLNDGRNALLDNRLSDFLF---VTARGTAMTRQMFWTLVKKYALVA---GMDPA--RLS 251

Query: 270 IHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH-SKER 312
            H LRH  AT LL+ G  + VV+ +LGH  + TT  Y+H ++ER
Sbjct: 252 PHVLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARER 295