Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 17/160 (10%)

Query: 155 LRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRD 214
           LRD  ++ VL+ TG R SE + +   D    +G  R+   K  +ER V + EE V  V +
Sbjct: 133 LRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIG-KGNKERLVPLGEEAVLWVEN 191

Query: 215 YIKEN----IKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIP--EGKRI 268
           Y++      +   ++D +F ++  Q   R    W          ++K   V+   + +++
Sbjct: 192 YLEYGRPWLLNGVASDVLFPSQRAQQMTRQTF-W---------HRIKHYAVLAGIDSEKL 241

Query: 269 VIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYSH 308
             H LRH  AT LL+ G  + VV+ +LGH  L TT  Y+H
Sbjct: 242 SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH 281