Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 373 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 167 TGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVEIVRDYIKENIK-RDSN 225
           TG R  E L ++    +   G   + D K       + A      V++ +      RD+ 
Sbjct: 216 TGMRLGEVLGLQVGHVNVADGVIDVMDAKAGTRAAYMTAG-----VKEILAARCAGRDAK 270

Query: 226 DYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIVIHSLRHGRATDLLDKG 285
           +++F     + G RV+  +I++VF +   +L  +GV     ++V H+LRH   + L  +G
Sbjct: 271 EFVFVQ---RGGGRVR--YISSVFSRVADELFNDGVTDARHKVVFHTLRHTFGSWLAQRG 325

Query: 286 VPIDVVKEILGHRSLETTLYYS 307
           VP+  +  ++GH SLE T  YS
Sbjct: 326 VPLYTIAVLMGHSSLEMTKRYS 347