Pairwise Alignments

Query, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

Subject, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 15/176 (8%)

Query: 134 INFDTYNRIIKEIILSNSRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRD 193
           I+ D+ + ++   I  N    LRD  I+ + + +G R +E  ++      +++   R+  
Sbjct: 113 IDVDSISHLLA--IEGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLG 170

Query: 194 TKTYEERTVVIAEETVEIVRDYIK--ENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKK 251
            K  +ER V +    +E +  ++K  + I  + N       + + GKR+    I    + 
Sbjct: 171 -KGNKERIVPVGRYAIEAISAWLKCRKQISCEDNALF----VTEKGKRLSHRSI----QA 221

Query: 252 AVRKLKEEGVIPEGKRIVIHSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYS 307
            + K  +E  +    R+  H LRH  AT +L+    +  V+E+LGH +L TT  Y+
Sbjct: 222 RMSKWGQEQAL--SMRVHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYT 275