Pairwise Alignments

Query, 389 a.a., Fic family protein from Methanococcus maripaludis S2

Subject, 371 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 72/300 (24%), Positives = 113/300 (37%), Gaps = 51/300 (17%)

Query: 39  KHLALSNDQALSNVSRLDGLLENFPNGELDLLERPFILKEAVLSSEIEGIHTTVSEVMIS 98
           K +   +D  L++ + LD LL N                  + SS IEG     + V  S
Sbjct: 36  KQMLSHDDSQLTSAAALDTLLANI-----------------IHSSAIEGEKLNAASVRSS 78

Query: 99  EKKKT-----KEKDTTLEVRNYKAALE---YGINKEITEELILEIHK-------ILLNEV 143
             KK      K   TT++       +      ++ E+T E IL  HK        L N V
Sbjct: 79  LAKKLGVSEDKPYPTTVQTDGLADIMLDALKNLDTELTLERILGWHKQLFLQGYTLFNPV 138

Query: 144 RG---QDTTPGEYKRIQNYIGSKRTELKYAKFVPAAPKRTKMLIRNLVEYINSPQE---F 197
            G   +  TP +       + S R +     F   +       +   +E+ N+ ++    
Sbjct: 139 IGGALRGDTPMQ-------VVSGRIDKPTVHFEAPSRATLDAELSQFIEWFNASRQDLGL 191

Query: 198 PNLFKIAIIHYQFEVIHPFRDGNGRTGRILIILLLLKYNILKKPVLYLSEFFNERRFEYQ 257
             L + AI H  F  +HP  DGNGR  R+L  L L +          +S     RR  Y 
Sbjct: 192 DPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIRFYAMSVSILARRQAYY 251

Query: 258 DRLYLVSSEGKID--DWIKFFLESVDIQSKRAFSFAKKLL---DYKKNLSNYIMDNDELK 312
           D L   +  G +D   W+ +F E ++     A +   K L    Y +N+   ++  D+ K
Sbjct: 252 DILE-STQRGDVDITPWLVWFFEILNDCLLNAMADVNKTLRKTQYWQNVDQSLLSQDQAK 310