Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 638 a.a., selenocysteine-specific elongation factor SelB from Pseudomonas stutzeri RCH2

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 68/325 (20%), Positives = 133/325 (40%), Gaps = 33/325 (10%)

Query: 8   LFGDFEDAGKNIAKKGTSTDITLYNHKNGDDSAV-FVEPTRYPERIQPLIYTINMMDYAL 66
           L G   D  +   ++G + D+       G+ S   F++   +   +  ++   + +D  L
Sbjct: 20  LTGQQGDRRREERERGITIDLGYVYADLGEGSLTGFIDVPGHERFVHNMLAGASGIDCVL 79

Query: 67  VFI---DEIKPEIGETLLTLDLFGVERGFIVVGEYVDVE---------QLKGIISNTSMK 114
           + +   D + P+  E L  ++L G+ R  + + +   VE         Q++ ++    + 
Sbjct: 80  LVVAADDGVMPQTREHLAIVELLGIRRALVALTKIDRVETARIAEVQRQIENLLVTGPLA 139

Query: 115 NFEFLEKDYIQ------IREKMI---TIPEVEKSSDFIKIPIDHFFSVKSVGTVILGKVD 165
                    I+      +R  +I          +S   ++ ID  FSV   G V+ G   
Sbjct: 140 GAPIFPVSSIRGDGVDALRTALIEEAARTAARSASGHFRLAIDRAFSVTGAGVVVTGTAF 199

Query: 166 KGSVSVHDNLRIYPTNNKAMVKSVQVHDRDVKEAETNSRVGLSLKG--ISVDDLDRGMIL 223
            G V + D L + PT  +  V+ +   +R+  EA    RV L+L G  ++V+ + RG  L
Sbjct: 200 AGRVRIGDELLLGPTGKRVRVRGLHAQNREADEAHAGQRVALNLAGERLAVEQIHRGDWL 259

Query: 224 SNGDLEV-SDKIELEMKWNPYMNKEVAVGEGYQIIVGLQTVSCKIEEKNGNKLT------ 276
            +  L   + +I+++ K  P    E+       + +G Q V+ ++       L       
Sbjct: 260 LHPLLHTPTQRIDIDFKLLPGEAHELKHWAPVHVHLGAQDVTARVALLEDASLAPGEHAF 319

Query: 277 --LKLLKPAAFEKGDKFIMLDGSAK 299
             L L  P+    GD+ ++ D SA+
Sbjct: 320 AQLLLNAPSHAVHGDRIVLRDQSAQ 344