Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 394 a.a., elongation factor Tu (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 27/218 (12%)

Query: 107 IISNTSMKNFE---FLEKDYIQIREKMIT-IPEVEKSSD-FIKIPIDHFFSVKSVGTVIL 161
           +I  +++K  E     E   I++ E + + IPE E++ D    +PI+  FS+   GTV+ 
Sbjct: 170 VIQGSALKALEGDAAWEGKIIELAEALDSYIPEPERAIDKAFLMPIEDVFSISGRGTVVT 229

Query: 162 GKVDKGSVSVHDNLRI--YPTNNKAMVKSVQVHDRDVKEAETNSRVGLSLKGISVDDLDR 219
           G+V++G + V + + I       K     V++  + + E       G+ L+G   D+++R
Sbjct: 230 GRVERGIIKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDEVER 289

Query: 220 GMILSN-GDLEVSDKIELEMKWNPYMNKE-----VAVGEGY--QIIVGLQTVSCKIEEKN 271
           G +LS  G ++   K E E+     ++KE         +GY  Q       V+  IE   
Sbjct: 290 GQVLSKPGTIKPHTKFESEVY---VLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPE 346

Query: 272 G---------NKLTLKLLKPAAFEKGDKFIMLDGSAKI 300
           G          K+ + L+ P A ++G +F + +G   +
Sbjct: 347 GVEMVMPGDNIKMVVTLICPIAMDEGLRFAIREGGRTV 384



 Score = 23.5 bits (49), Expect = 0.009
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 88  VERGFIVVGEYVDVEQLKGIISNT 111
           VERG I VGE V++  +K     T
Sbjct: 232 VERGIIKVGEEVEIVGIKDTTKTT 255