Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 394 a.a., elongation factor Tu (RefSeq) from Shewanella loihica PV-4

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 25/189 (13%)

Query: 133 IPEVEKSSD--FIKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRI--YPTNNKAMVKS 188
           IPE E++ D  FI +PI+  FS+   GTV+ G+V++G V V D + I       K     
Sbjct: 200 IPEPERAIDGAFI-LPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGIKETTKTTCTG 258

Query: 189 VQVHDRDVKEAETNSRVGLSLKGISVDDLDRGMILSN-GDLEVSDKIELEMKWNPYMNKE 247
           V++  + + E       G+ L+G   D+++RG +L+  G +    + E E+     ++KE
Sbjct: 259 VEMFRKLLDEGRAGENCGVLLRGTKRDEVERGQVLAQPGSITPHTQFESEVY---VLSKE 315

Query: 248 -----VAVGEGY--QIIVGLQTVSCKIEEKNG---------NKLTLKLLKPAAFEKGDKF 291
                    +GY  Q       V+  IE   G          K+ + L+ P A ++G +F
Sbjct: 316 EGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLICPIAMDEGLRF 375

Query: 292 IMLDGSAKI 300
            + +G   +
Sbjct: 376 AIREGGRTV 384