Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 428 a.a., translation elongation factor EF-1 subunit alpha from Methanococcus maripaludis JJ

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 15/180 (8%)

Query: 52  IQPLIYTINMMD---YALVFIDEIKPEIGETLLTLDLFGVER-GFIVVGEYVDVEQLKGI 107
           I  L   IN MD   ++    +E+K  +G+ LL +  F  +   FI V   +     K  
Sbjct: 141 ITQLAVAINKMDTVNFSEADYNEMKKMLGDQLLKMVGFNPDNINFIPVASLLGDNVFKKS 200

Query: 108 ISNTSMKNFEFLEK--DYIQIREKMITIPEVEKSSDFIKIPIDHFFSVKSVGTVILGKVD 165
              T   N   L +  D  Q  EK  T+P        +++PI   +S+  VGTV +G+V+
Sbjct: 201 -DKTPWYNGPTLAEVIDGFQPPEKPTTLP--------LRLPIQDVYSITGVGTVPVGRVE 251

Query: 166 KGSVSVHDNLRIYPTNNKAMVKSVQVHDRDVKEAETNSRVGLSLKGISVDDLDRGMILSN 225
            G +   D +   P      +K+V++H   +  AE    +G +++G+   D+ RG +L +
Sbjct: 252 TGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGH 311