Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 673 a.a., selenocysteine-specific translation elongation factor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 117 EFLEKDYIQIREKMITIPEVEKSSDFIKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLR 176
           E L++  + I E+  T  + E +S F ++ +D  FSVK VG V+ G V  GSV V D+L 
Sbjct: 157 ETLKQHILDIAEQQST--QAEDASSF-RMTLDRAFSVKGVGCVVTGTVISGSVCVGDSLY 213

Query: 177 IYPTNNKAMVKSVQVHDRDVKEAETNSRVGLSLKGI 212
                 K  V+ +     +V  A + +RV L+L G+
Sbjct: 214 SSGQKAKLRVRGIHCQGMEVHRALSGTRVALNLTGV 249