Pairwise Alignments

Query, 309 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 397 a.a., translation elongation factor Tu (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 133 IPEVEKSSDF-IKIPIDHFFSVKSVGTVILGKVDKGSVSVHDNLRI--YPTNNKAMVKSV 189
           IPE ++  D    +PI+  FS+   GTV+ G+V++G + V + + I       K+    V
Sbjct: 203 IPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKDTTKSTCTGV 262

Query: 190 QVHDRDVKEAETNSRVGLSLKGISVDDLDRGMILS 224
           ++  + + + +    +G  L+G+  DD++RG +L+
Sbjct: 263 EMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLA 297



 Score = 23.5 bits (49), Expect = 0.009
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 88  VERGFIVVGEYVDVEQLKGIISNT 111
           VERG I VGE V++  +K    +T
Sbjct: 235 VERGVIKVGEEVEIVGIKDTTKST 258