Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  106 bits (265), Expect = 1e-27
 Identities = 107/449 (23%), Positives = 197/449 (43%), Gaps = 21/449 (4%)

Query: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60
           MK    L    I  ++++  +P++ G + I  + ++D  F+ + +G E LA ++F+FPV 
Sbjct: 1   MKDRHGLLTAPIAGVLLKMTLPNMLGILTILGFSLVDTFFVSQ-LGTEALAAISFTFPVT 59

Query: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120
           + +SSI V IGAG S  +   +G      A   L  AL     I   +   G + IDP+ 
Sbjct: 60  LVLSSIAVGIGAGVSTNLGRLIGSGHAPDAKVFLHDALLLTFAIVGTLASLGLMFIDPLF 119

Query: 121 SFMNLSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180
           S +  ++     +  Y  +  LG+   +  +  +  LR+ G  K    I+AL ++ N+IL
Sbjct: 120 SLLGANEQSLPLIHEYMLVWYLGSPLLVLLMVGNQGLRSTGDTKSPAKIMALAAIINLIL 179

Query: 181 DYMLIVVFNFG------VMGAAAAT----VLAQGLGS-ILYLKHFLSGKSNVKIGKNSPF 229
           D +LI  F  G      + GAA A+    VLA  L S +L +K  +   + +      P 
Sbjct: 180 DPLLI--FGLGPFPRLEIQGAAIASVISWVLAMSLSSYLLIVKRHMLALTEIA----WPR 233

Query: 230 LEFSLIKRIAKTGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVY 289
           L+ +  +++A       +M L   I   V      R      V+A+G    + S L +V 
Sbjct: 234 LKDNW-RKLAHIAQPAALMNLMNPIANAVIMAMLARIDHGA-VAAFGAGTRLESVLLIVV 291

Query: 290 LGISEGVQPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHD 349
           + +S  + P ++ N GA +  R  + L  ++    +     +L +L     +  +F+  +
Sbjct: 292 MALSSSLMPFVAQNLGAGQHQRARDALMMSLRFVLLFQFLLYLPLLLLAGPIAGLFS-DE 350

Query: 350 TNLIATTTIGLEIHNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLP 409
             ++   T  +     A   +GV ++      A  +P  +  +++ R  + +LP   L  
Sbjct: 351 PKVVEWLTFYIIALPAAYGPLGVVIITATALNAFHRPLASLIINVCRLFLLMLPLCALGS 410

Query: 410 IYLGIKGIWWATVFSEYLSFIITIYFITK 438
              G+KG+  A   +  L  I   Y  ++
Sbjct: 411 FLYGVKGLMVALPVTNALMGIACYYLASR 439