Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 443 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (555), Expect = 3e-61
 Identities = 130/440 (29%), Positives = 230/440 (52%), Gaps = 12/440 (2%)

Query: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60
           M   + +    ++ L  RY +P+IA  ++ GIY  IDG+F+G  +G  GLAG+  ++PV 
Sbjct: 1   MNHTQAMLEAPVSRLFWRYTLPTIASMLVTGIYVTIDGMFVGHFLGETGLAGIMLAYPVG 60

Query: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120
             + ++G +IG G+ A++SI LG+    KA  +L  A + ++L +L  T  G +    ++
Sbjct: 61  ALLYAVGALIGMGAGALVSIKLGEGKTAKARELLGNAFSLVLLSALFFTLVGSVSARHIL 120

Query: 121 SFMNLS----KNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVF 176
            ++       ++   Y+  Y  + I   I+  F+     +LRNDG P     +L    V 
Sbjct: 121 IWLGAEGEVLESAHDYLFWYFALCIFPLISMAFST----LLRNDGKPAFVTWVLIAGGVI 176

Query: 177 NIILDYMLIVVFNFGVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIK 236
           N +LDY+ IVV++FG+ GA+ AT+L+Q +  +L L+HF SGK+ ++I      L+     
Sbjct: 177 NTLLDYLFIVVWDFGLAGASVATMLSQAVTGLLCLQHFFSGKTALRIDFEQMRLKLDNCL 236

Query: 237 RIAKTGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGV 296
            I++ G    +M L   I++ +HN   +  G+ L V+AYG+V Y  +F Y+++ GI+ G 
Sbjct: 237 NISRVGLPSLLMNLYLSIVLTLHNTALLWVGTPLHVAAYGVVSYTEAFFYLIFEGIALGS 296

Query: 297 QPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATT 356
           QP++S+N GA + +RV +    A+ V  +      L I   P   + IF   +  L    
Sbjct: 297 QPVLSFNAGAGRMDRVRQTRNLAMAVTLLTAGLGLLFIYGRPEWALYIFAGDNPVLSPVA 356

Query: 357 TIGLEIHNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKG 416
             G+ ++ + +   G+ +V   +F A  +P+ A  L+ G  L+ I   I       G+ G
Sbjct: 357 IEGMRLYFWGLPFEGLILVGASFFQAINKPREASILT-GTKLLLIAAVIYSFAWLFGVPG 415

Query: 417 IWWATVFSEYLSFIITIYFI 436
           +W   V    +S ++T++ +
Sbjct: 416 VW---VSLACVSSVLTLWMV 432