Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 84.3 bits (207), Expect = 8e-21
 Identities = 89/446 (19%), Positives = 190/446 (42%), Gaps = 29/446 (6%)

Query: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60
           M Q K +E   + ++++     ++ G   + +  ++D  F+     AE  A V ++  + 
Sbjct: 1   MTQAKFVEGPILRHILVMSSTAAV-GISALFLVDLLDIFFLSLLGEAELAAAVGYAGTIS 59

Query: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120
              +SIG+ +     A +S ++G ++   A  +L ++L   + +S +++    L I  ++
Sbjct: 60  FFTTSIGIGLSIALGAQVSRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALL 119

Query: 121 SFMNLSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180
           + +  +         Y  I++        A++L   LR  G  K SM+   +    N++L
Sbjct: 120 TLVGATGQTAELAADYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVL 179

Query: 181 DYMLIVVFNFGVMGAAAATVLAQ-----GLGSILYLKHFLSGK--SNVKIGKNSPFLEF- 232
           D +LI V   G+ GAA A+VLA+       G  +++KH L  K   +  +G   P     
Sbjct: 180 DPILIFVLAMGIEGAAVASVLARLSVMLVAGRGVFVKHGLGSKPTRDAFVGDLKPIFAIA 239

Query: 233 --SLIKRIAKTGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYL 290
             ++I  +A    + F+                  +G +  V+ + ++  +T   + +  
Sbjct: 240 GPAMITNVATPIGNGFMTR------------AIAEFGDAY-VAGWAVLGRLTPVAFGMIF 286

Query: 291 GISEGVQPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDT 350
            +S  + P++  N GA++++R+ + L +++    +  +   L +    +L++  F   D 
Sbjct: 287 ALSGAIGPIVGQNFGARRYDRLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAF---DL 343

Query: 351 NLIATTTIGLEIHNFAILIM--GVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILL 408
              +   IG  +   A+  +  G   V    F    + K +   ++G+  +  LP I L 
Sbjct: 344 KGDSAEFIGFFLTYIAVFFVFSGALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLG 403

Query: 409 PIYLGIKGIWWATVFSEYLSFIITIY 434
             Y G+ G+    V    L  +  +Y
Sbjct: 404 AQYGGVYGVLIGQVLGSVLFGVAGVY 429