Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 455 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 6e-15
 Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 22/357 (6%)

Query: 7   LENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSI 66
           L N   N  +    +P I   + + + G++D   IG    A  L GV     ++  I  +
Sbjct: 12  LFNGTKNRQLFALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWL 71

Query: 67  GVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLS 126
              +   ++ +++ + G  D      +L         + + +      L+   +SF   S
Sbjct: 72  LGFLRMATTGLVAQAYGANDINAQLKLLVQGAMLATGLGIAMILLQVPLLSLALSFSEAS 131

Query: 127 KNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV 186
             +E Y   Y +I I      +  + +   L     PK +M  L   +V NIILD + ++
Sbjct: 132 VEVERYCREYFQIRIWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVL 191

Query: 187 VFNFGVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAKTGFSPF 246
            F +GV GAA A+V A      + L   L     VK+  N PF E  +   I  TGF   
Sbjct: 192 GFGWGVKGAALASVFADITAFSVALYMVL---QQVKLIPNYPFAE--IRAHIRFTGFGQL 246

Query: 247 I---MELAFGILMIVHNIQFMRY-GSSL---DVSAYGIVIYITSFLYMVYLGISEGVQPL 299
           +    ++    L +     FM + G+ L    V+A  +++ +   +     GI+   +  
Sbjct: 247 LRLNSDIFIRSLCLQTAFAFMTFHGAGLGDNTVAANAVLLNLLLLISYALDGIAYYAEAE 306

Query: 300 ISYNHGAKKFNRVFEILKKAVFVNAILGIC-SFLTILKFPNLLIKIFNPHDTNLIAT 355
           +   +G K+  ++ E +        +L  C S +T L F  L+  ++  H   L+ +
Sbjct: 307 VGKAYGQKRAQQLHEAV--------VLAWCWSAITALGF-TLIFSLWGSHIIELLTS 354