Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  222 bits (566), Expect = 2e-62
 Identities = 134/418 (32%), Positives = 215/418 (51%), Gaps = 9/418 (2%)

Query: 5   KKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAIS 64
           ++L  E I  L  RY IP+IA  ++ G+Y  IDGIF+G  +G  GLAG+  ++PV   + 
Sbjct: 11  QRLLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILY 70

Query: 65  SIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMN 124
           +IG MIG GS+A++SI+LG+ +  KA  +L  A +  +L        G +    ++  + 
Sbjct: 71  AIGAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALG 130

Query: 125 ----LSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180
               + +N   Y+  Y  +     I+  F      +LRNDG P     +L L  V N  L
Sbjct: 131 AEGEILENANEYLFWYFALCHFPIISMAFTT----LLRNDGRPSMVTFVLILGGVLNTFL 186

Query: 181 DYMLIVVFNFGVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAK 240
           D++ IVVF FG+ GAA AT+L+Q +  +L L+HF   ++ +KI      L+      IA+
Sbjct: 187 DWLFIVVFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIAR 246

Query: 241 TGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLI 300
            G   F+M L   I++ +HN  F+  G  L V+AYG+V Y  +F Y+++ GI+ G QP+ 
Sbjct: 247 VGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIY 306

Query: 301 SYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATTTIGL 360
           S+N GA +F+RV +    A  +  +      + I   P  L+ +F   + +L      G+
Sbjct: 307 SFNAGAGRFDRVKQARNIAFSMTLLTAALGLVLIYSRPEWLVYLFAGDNPSLTPVAIEGM 366

Query: 361 EIHNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKGIW 418
             + + + + G+ +V   +F A    K A  L+ G  LI I   I       G+ G+W
Sbjct: 367 RWYFWGLPMEGLILVGASFFQAINCSKQASILT-GAKLILIAAIIYCFAWAFGVIGVW 423