Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 453 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 68/327 (20%), Positives = 147/327 (44%), Gaps = 31/327 (9%)

Query: 22  PSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSIGVMIGAGSSAIISIS 81
           P    T++  + GI D IF+        +A V  +  ++  +  + +M+  G+S +IS +
Sbjct: 20  PIFIETLLQSLLGISD-IFMLSHYSDNAVAAVGLTTQLMFFMMVMSMMVSTGASILISQN 78

Query: 82  LGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKNLESYVVGYSKIII 141
            G    ++A+ I   ++   + +++++    +     +I    L   +  Y  GY  ++I
Sbjct: 79  NGAGRTQEATDIGVASVALSLGLAVVMGAAMFFCAHGIIGLFELEPKVAGY--GYDYLLI 136

Query: 142 LG--AIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV----VFNFGVMGA 195
            G  +I  +  I+   ILR+ GF + +M++     + N++ +Y+ +     +  +GV G 
Sbjct: 137 CGSLSIGLVMNIAFAAILRSYGFTRSAMLVTLSTGLMNVLGNYIALYSPFGLPVYGVTGV 196

Query: 196 AAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAKTGFSPFIMELAFGIL 255
           A +TV +Q +G+++ L    S        K+ P      ++R+     S +   +  G+L
Sbjct: 197 AISTVTSQLMGALIMLAVIRS--------KHIPL----PMQRLNSLPRSTYWSVMRIGLL 244

Query: 256 ----MIVHN------IQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHG 305
               M+ +N      I F+    +L ++AY   + I+ F+Y   + + +  Q    Y  G
Sbjct: 245 NAGEMLSYNVAQMTIIYFISQMGTLSLTAYTYGLNISRFIYCFSVALGQAAQIQTGYYVG 304

Query: 306 AKKFNRVFEILKKAVFVNAILGICSFL 332
            + F+ +   ++K   V  I+ +   L
Sbjct: 305 KQWFDEITVRVQKYCLVGFIVSLAIVL 331