Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  113 bits (283), Expect = 1e-29
 Identities = 111/463 (23%), Positives = 209/463 (45%), Gaps = 37/463 (7%)

Query: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60
           MK    L +  I  +++   +P++ G + I  + + D  FI + +G E LA ++F+FPV 
Sbjct: 1   MKDRHGLLSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQ-LGTEALAAISFTFPVT 59

Query: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120
           + ISSI + +GAG S  +   +G  +  +A   L  AL    ++   ++  G + I+P+ 
Sbjct: 60  LIISSIAIGVGAGVSTNLGRLIGSGNAPQAKVFLHDALLLTFILIASLSALGSIFIEPLF 119

Query: 121 SFMNLSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180
           S +  ++     +  Y     +GA   +  +  +  LR+ G  +   +I+ L ++ N+IL
Sbjct: 120 SLLGANETSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMTLAAIINLIL 179

Query: 181 DYMLIVVFNFG------VMGAAAATVLAQGL-----GSILYLKHFLSGKSNVKIGKNSPF 229
           D +LI  F  G      + GAA AT+ +  +     G +L +KH +  ++   I +    
Sbjct: 180 DPLLI--FGIGPFPRLEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAAFDIDRMR-- 235

Query: 230 LEFSLIKRIAK-TGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMV 288
             +S +  IA+       I  LA  ++M +     + +     V+A+G    + S L +V
Sbjct: 236 ANWSKLAHIAQPAALMNLINPLANAVIMAM-----LAHIDHSAVAAFGAGTRLESVLLIV 290

Query: 289 YLGISEGVQPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPH 348
            + +S  + P I+ N GA +  R      K   + ++  I  F T+L  P   +  F   
Sbjct: 291 VMALSSSLMPFIAQNLGAGQPQRA-----KQALLLSLKFILVFQTLLYIP---LAFFAQP 342

Query: 349 DTNLIATTTIGLEIHNFAILI-------MGVSMVLMMYFLATEQPKIAGFLSLGRTLIFI 401
             +L +T    LE  +F IL+       +G+ ++      A  +P  +  ++L R ++ +
Sbjct: 343 LASLFSTDPQVLEWLSFYILVLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLM 402

Query: 402 LPAIILLPIYLGIKGIWWATVFSEYLSFIITIYFITKEFKKIK 444
           LP   L     G+KG+  A   +  L  I   Y   +  + +K
Sbjct: 403 LPLAALGSYIDGVKGLLLALPITNLLMGIACYYLAQRICEPVK 445