Pairwise Alignments

Query, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 450 a.a., putative Na+-driven multidrug efflux pump (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  237 bits (604), Expect = 7e-67
 Identities = 130/439 (29%), Positives = 234/439 (53%), Gaps = 4/439 (0%)

Query: 7   LENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSI 66
           L  EKI  L+++Y IP+I       +Y ++D IFIG  +GA  ++G+  +FP++   ++ 
Sbjct: 10  LGTEKIGKLLMQYAIPAIIAMTASSLYNMVDSIFIGHGVGAMAISGLALTFPLMNLAAAF 69

Query: 67  GVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLS 126
           G ++G G++ ++S+ LG+KDY  A  +L   L   I+I L  T    + +DP++ F   S
Sbjct: 70  GSLVGVGAATLVSVKLGQKDYDTAQRVLGNVLVLNIIIGLAFTVLTLIFLDPILYFFGGS 129

Query: 127 KNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDYMLIV 186
           +    Y   Y  +I+ G +     + L+ +LR+ G P+K+M       V N ILD + I 
Sbjct: 130 EATVGYARDYMVVILWGNVITHLYLGLNAVLRSAGHPQKAMYATIATVVINTILDPIFIY 189

Query: 187 VFNFGVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAKTGFSPF 246
            F +G+ GAA AT+ AQ +  +   K F +    +   K    L+  ++      G +PF
Sbjct: 190 GFGWGIQGAAIATITAQVIALLWQFKLFSNKDELLHFHKGIFRLKKKIVFDSLAIGMAPF 249

Query: 247 IMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGA 306
           +M LA   ++I+ N    ++G  L + A+GIV  +     M+ +G+++G+QP+  YN GA
Sbjct: 250 LMNLAACFIVILINKGLKQHGGDLAIGAFGIVNRLVFLFVMIVMGLNQGMQPIAGYNFGA 309

Query: 307 KKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATTTIGLEIHNFA 366
           K++ RV ++LK  ++   I+    FL  +  P L + IF  H+  L+  +  GL I    
Sbjct: 310 KQYPRVTQVLKITIYAATIVTTIGFLMGMFIPQLAVSIFTTHE-ELVNISAKGLRIVVMF 368

Query: 367 ILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKGIWWATVFSEY 426
             I+G  MV   +F +      A FLS+ R ++ ++P +++LP + G  G+W +   S+ 
Sbjct: 369 FPIVGFQMVTSNFFQSIGMASKAIFLSISRQVLVLIPCLLILPRFYGQLGVWISMPISDL 428

Query: 427 LSFIIT---IYFITKEFKK 442
           ++ +I    +++  ++F+K
Sbjct: 429 IASLIAGGMLWWQFRQFRK 447